Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01659 ATGGGGATTGTGCTTTCAAGGCGAATTTTACCACCGATGGCGGCGAAGTTGAAGGAGAGTGTGAAGGAGAAGCTTAAAGAGTTCATGGGGGAGTACACCGATGACACTGTGGCAGAACCACTCGACGCGACGATGGCACACGACACAAAGCCGGAAACGACGCCTCAAGTGTCTCGAGCTTATGAACTAGAAAACGCGCTTCAACGTTGTCGTTTCAGTGCCAAAGGGTTGGAGTACTTGCACAATTGTTGTGACCCTCTAATGATTCACAGTGACATTAAACTGAGTAATATTTTGTTGGATTCTGAGTTTACGGCTCAAATTGGGGATTTTAGGCTTGCCAGGGTGAAGGAGGAGGTTAGGATTGTGGTGGTGGCTGTGGTGGAGGCGGCAGTGGTGATAAAGAGTGTGATCGTGGTTCAGTGGTGGAGAGTATAG 438 0.4886 MGIVLSRRILPPMAAKLKESVKEKLKEFMGEYTDDTVAEPLDATMAHDTKPETTPQVSRAYELENALQRCRFSAKGLEYLHNCCDPLMIHSDIKLSNILLDSEFTAQIGDFRLARVKEEVRIVVVAVVEAAVVIKSVIVVQWWRV 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01659 145 PANTHER OS07G0586332 PROTEIN 74 120 IPR044576 -
Aip08g01659 145 Pfam Protein kinase domain 74 118 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01659 145 ProSitePatterns Serine/Threonine protein kinases active-site signature. 88 100 IPR008271 GO:0004672|GO:0006468
Aip08g01659 145 ProSiteProfiles Protein kinase domain profile. 1 145 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01659 145 Gene3D Transferase(Phosphotransferase) domain 1 17 127 - -
Aip08g01659 145 SUPERFAMILY Protein kinase-like (PK-like) 66 121 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01659 Aip-Chr8 32498176 32498613 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01659 73 132 Receptor kinase-like Gene Family AT1G34210 50.000 4.94e-14 66.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Aip08g01659 Pkinase 3e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01659 - K13416 aip:107626015 69.3218