Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01648 ATGATGAAGTTGGAGGAATTCAAAGCCGTCGTGTATCGCGGAAAACAAGGCATTCCATTGTCTGCTGACCACAAACCAAATAGGGAGGATGAGTGGGCAAGGATAGAAGCTGCAGTAGGAAGGGTCATACATTGGCAAGGGTACCGAGTTCTTGGCGTTTTGGCAATGTCAAAATCCATAGGTGATAGGTACTTGAAACCATGTATTATTCCAGAACCGAAAGTGAAGTTTGTGCAACGGGAGAAACATGACGAGTGCCTTATTCTAGCTAGTGATGGTTTATGGGATGTGATGACAAATGAAGAAGCCTGTGAAGTTGCACGGAAGAGGATCCTTCTTTGGCACAATGAAAATGATGTTTGGAGGAGTTTGATTGAAGCCTTCGAAGCACCAAATATTGGAAACATGGACAGGCAAAGCATTTTAGAAGTAGCTTTTGTCCTTTTTCTTTCTTCCCCCCAACCCCCCGCTCCCCAACAAAATTGGTCATAG 492 0.4431 MMKLEEFKAVVYRGKQGIPLSADHKPNREDEWARIEAAVGRVIHWQGYRVLGVLAMSKSIGDRYLKPCIIPEPKVKFVQREKHDECLILASDGLWDVMTNEEACEVARKRILLWHNENDVWRSLIEAFEAPNIGNMDRQSILEVAFVLFLSSPQPPAPQQNWS 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01648 163 ProSiteProfiles PPM-type phosphatase domain profile. 1 163 IPR001932 -
Aip08g01648 163 CDD PP2Cc 8 111 IPR001932 -
Aip08g01648 163 Pfam Protein phosphatase 2C 8 127 IPR001932 -
Aip08g01648 163 PANTHER ALPHABET, ISOFORM E-RELATED 8 124 - -
Aip08g01648 163 SMART PP2C_4 2 144 IPR001932 -
Aip08g01648 163 Gene3D - 7 141 IPR036457 -
Aip08g01648 163 PANTHER PROTEIN PHOSPHATASE 2C ABI2-LIKE PROTEIN 8 124 - -
Aip08g01648 163 SUPERFAMILY PP2C-like 9 127 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01648 Aip-Chr8 32108400 32109896 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01648 8 120 PP2C-type Phosphatase Gene Family AT4G26080 72.566 4.59e-55 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01648 K14497 - gmx:100802159 196.823