Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01623 ATGGAGAATCATCATCATTATTCATCGAAGGGAAGAAGGGAAATAATGGAGCAAGAGCTACTTAGAGGGCGTGACGTCGCAAATCAATTGCTTCAACTTCTTGTTCATAGATCCAATAATAATGATGAACAAGGGTTGACGTTGATCTTGCCATTTGCTGAAGATCTTGTGCACCAAGTGCTAAGATCATTCACAAACACCCTTTTGCTCTTGAACATTTCCAATAATAGTAATAATAATATTGATGATGCAATTTTTCCCATCAAAGATTTATCTTCTTCTTCTTCCCCATCAAGTTGCCAAAAGCATGAAAATTTAGATGAGGCTTGCAAAAGCTTCCACACAAATAATCGAAGAGGGCGCTACAAGAGAAAATCATCTGTACCAACATGGGAGAAGGACAGTCCAATTTTAATTGAAGATGGACATGAATGGAGAAAATATGGACAAAAGATGACAATGAATTCAAAATACCTAAGGAATTATTATAGGTGCAGTCACAAGAATGATCAAGGTTGCCCAGCAACCAAAAAAGTGCAACAAATTCAAGACAATCCACCATTGTTCCGAACAAGCTATTTTGGTCATCACAATTGCAAAAGCATCACTTATAATGAGGAAACAATTTTGGCATCTGAATCTTTTTCCGAATCTTCTATGTTCCTTAGCTTCAATAATAATAATAATAATAATAATAATAATAATAACAATAATAGCAATGTTATTATTACACCTAGCAAAGAACACCAATTTTCATCATCACAAGCTTTTGGATCAAAAAACTTCATCTCACAAAACCAATTATTACTATCCTCATCAGATTACTACCACCCATTATGTGTCTATGAAGAACTTGGTTTCGACTATTCTAGGCATCATGATCCTATGCTATCATCCACTGAAAAGGTTCAATTTGACAATAATGCTTTAGGGTGGGACTTATTGGATTATGATGGCTTGGCATGTTATGGTCAACAAAATTAA 984 0.3476 MENHHHYSSKGRREIMEQELLRGRDVANQLLQLLVHRSNNNDEQGLTLILPFAEDLVHQVLRSFTNTLLLLNISNNSNNNIDDAIFPIKDLSSSSSPSSCQKHENLDEACKSFHTNNRRGRYKRKSSVPTWEKDSPILIEDGHEWRKYGQKMTMNSKYLRNYYRCSHKNDQGCPATKKVQQIQDNPPLFRTSYFGHHNCKSITYNEETILASESFSESSMFLSFNNNNNNNNNNNNNNSNVIITPSKEHQFSSSQAFGSKNFISQNQLLLSSSDYYHPLCVYEELGFDYSRHHDPMLSSTEKVQFDNNALGWDLLDYDGLACYGQQN 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01623 327 ProSiteProfiles WRKY domain profile. 134 202 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip08g01623 327 SUPERFAMILY WRKY DNA-binding domain 137 200 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip08g01623 327 SMART WRKY_cls 139 201 IPR003657 GO:0003700|GO:0006355|GO:0043565
Aip08g01623 327 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 9 307 IPR044810 GO:0003700
Aip08g01623 327 Gene3D WRKY domain 125 201 IPR036576 GO:0003700|GO:0006355|GO:0043565
Aip08g01623 327 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 9 307 - -
Aip08g01623 327 Pfam WRKY DNA -binding domain 140 200 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01623 Aip-Chr8 30862762 30872771 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01623 10 240 WRKY Transcription Factor Family AT3G56400 32.129 6.46e-29 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Aip08g01623 WRKY 1.1e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01623 - - aip:107610898 402.519