Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01578 ATGGTGGCTACTTATATGATTAAGGATTATAGGAACAAAGTTGAATCTGAGTTGACTGATATCTGCACTGATATCATGGTTCTTATTGATGAACACCTTGTTCCATCTTGTTCTGGTGGTGTACCTAGTGTCTTCTTTTATAAGTTGGGAACTATTATGGCCGAAATCAAGTATGGTGATAAGAGAAAAGAGGCTGCTGATCAGTCCTTGAAAGCATCTCAGTGTAATTCATTCATTAAACCAGAGAGGCATCAGGTTTTCACGGCCAAAAAGTATCTTAATGTATCGAGCTTCTCCTGTCTTCACACAGAACAAAATTCCTCAGTGGAAGCTCTCTCACAAGATGAGGATGTGGTGATTGCTTTGGGAAGTAATGTAGGTAATAGGGTTCATAACTTCAAGGAAGCCTTGAAAATGATGAAGAAGTCAGGCATACAGGTCACAAGGCATGCTTGTTTGTATGAGACAGCACCAGCATACATTACTGATCAACCTTGCTTTATCAACTCTGCAGTTAGAGCTGTTACTAAACTAGGTCCACATGAATTATTGGCTGCGCTCAAAAGAATTGAGAAGAACCTCGGGCGAACCGATGGAATAAGAATTTGGGAGCGGCCTTTTGTTATCGCCCCTTTGGTGGATTTACTGGGATCAGCTATTGACAATGATACAGTTGCTAGTTGGCATTCATTTTCGAGCCATTCTGGTGGACTATATGAATTATGGGAAAAATTAGGCGGGGAATCGCTTATTGGACAGGATGGTATATGTAGGGTAATGCCTGTTGCAAATGGCTTACTTGATTGGTCCTTGAGAACTTCCGTTATGGGCATCCTTAATTTGACCCCAGATAGTTTTAGTGATGGGGGGAATTTCCAGTCTGTGGAATCTGCTGTATCGCAAGTTCGATTAATGATTTCAGAGGGAGCAGATATAATTGATATTGGTGCTCAGTCTACGCGACCAAAGGCATCTAGGATCTCTGTTGAAGAAGAATTAAGTAGATTAATCCCTGTCCTAGAAGCTGTAAAGTCAATGCCCGAGTTAGAGGGAAAGCTCATATCTGTTGATACTTTCTACTCAGATGTTGCTTCAGAAGCAGTTAGTAGAGGGGCTCATCTTATAAATGATGTATCTGCAGGGCAGTTAGATCCTAATATGTTCAAGGTCATTGCAGATCTAGATGTTCCTTATGTTGCGATGCATATGAGGGGGGACCCATGCACTATGCAGAGCAGTGAAAACCTGAAATATGATGATGTTTGCAAGGAGGTGTCCTCCGAGTTATATTCAAGGGTTAGGCAGGCAGAACTGTCAGGAATCCCAGCATGGAGGATCATTATTGACCCTGGTATCGGATTCTCAAAAAAAACTGAAGACAATTTGGATATCCTCACAGGACTTCCTGCTATCCGAGCTAAGATTGCCAAGAGTAGCTTTGCCATCTCTCGTGCTCCTATACTTATTGGACCCTCAAGAAAGAGATTTCTAGGTGACATTTGTTCCAGACCTTCTGCTGTTGAGAGGGATCCTGCTACCATTGCTTCTATAACAGCGGGTGTTCTGGCTGGAGCTAACATTGTTAGGGTGCATAATGTCAAAGATAATTGTGATGCTGTGAAGCTTTGCGATGCAATTCTAAAACATAAACGTTCTGCCATGGAATCTAGACAATGA 1677 0.4198 MVATYMIKDYRNKVESELTDICTDIMVLIDEHLVPSCSGGVPSVFFYKLGTIMAEIKYGDKRKEAADQSLKASQCNSFIKPERHQVFTAKKYLNVSSFSCLHTEQNSSVEALSQDEDVVIALGSNVGNRVHNFKEALKMMKKSGIQVTRHACLYETAPAYITDQPCFINSAVRAVTKLGPHELLAALKRIEKNLGRTDGIRIWERPFVIAPLVDLLGSAIDNDTVASWHSFSSHSGGLYELWEKLGGESLIGQDGICRVMPVANGLLDWSLRTSVMGILNLTPDSFSDGGNFQSVESAVSQVRLMISEGADIIDIGAQSTRPKASRISVEEELSRLIPVLEAVKSMPELEGKLISVDTFYSDVASEAVSRGAHLINDVSAGQLDPNMFKVIADLDVPYVAMHMRGDPCTMQSSENLKYDDVCKEVSSELYSRVRQAELSGIPAWRIIIDPGIGFSKKTEDNLDILTGLPAIRAKIAKSSFAISRAPILIGPSRKRFLGDICSRPSAVERDPATIASITAGVLAGANIVRVHNVKDNCDAVKLCDAILKHKRSAMESRQ 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01578 558 Pfam 14-3-3 protein 5 72 IPR023410 -
Aip08g01578 558 Pfam Pterin binding enzyme 276 531 IPR000489 GO:0042558
Aip08g01578 558 ProSitePatterns Dihydropteroate synthase signature 1. 275 290 IPR000489 GO:0042558
Aip08g01578 558 TIGRFAM folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 118 205 IPR000550 GO:0003848|GO:0009396
Aip08g01578 558 PANTHER FOLIC ACID SYNTHESIS PROTEIN FOL1 105 548 - -
Aip08g01578 558 SUPERFAMILY 14-3-3 protein 6 72 IPR036815 -
Aip08g01578 558 Gene3D - 256 553 IPR011005 GO:0044237
Aip08g01578 558 CDD DHPS 273 544 IPR006390 GO:0004156|GO:0009396
Aip08g01578 558 ProSitePatterns Dihydropteroate synthase signature 2. 309 322 IPR000489 GO:0042558
Aip08g01578 558 PANTHER FOLATE SYNTHESIS PROTEINS 105 548 IPR045031 GO:0004156|GO:0009396
Aip08g01578 558 Gene3D - 116 203 IPR035907 -
Aip08g01578 558 CDD HPPK 118 215 IPR000550 GO:0003848|GO:0009396
Aip08g01578 558 TIGRFAM DHPS: dihydropteroate synthase 275 545 IPR006390 GO:0004156|GO:0009396
Aip08g01578 558 SUPERFAMILY Dihydropteroate synthetase-like 263 551 IPR011005 GO:0044237
Aip08g01578 558 Pfam 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 119 203 IPR000550 GO:0003848|GO:0009396
Aip08g01578 558 ProSiteProfiles Pterin-binding domain profile. 273 541 IPR000489 GO:0042558
Aip08g01578 558 SUPERFAMILY 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK 118 222 IPR035907 -
Aip08g01578 558 Gene3D - 3 114 IPR036815 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01578 Aip-Chr8 27920306 27922683 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01578 7 74 14-3-3 family AT2G42590 55.556 4.34e-17 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01578 K13941 - gmx:100808899 738.028