Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01577 ATGGCTTCCTCTTCCAAGGACCGTGAGAACTTCGTCTACATAGCTAAGCTAGCTGAGCAAGCTGAACGCTATGATGAAATGGTGGTGGCCATGAAGAAGGTAGCGAAGCTTGACGTTGAGCTGAGTGTGGAAGAGAGGAACCTGTTCTCTGTTGGGTACAAGAACGTGGTGGGTTCAAGGAGGGCTTCATGGAGGATCCTGTCAAAGATAGAGCAGAAGGAAGAGTCAAGGGGCAATGAGGTAAATGCAAAGCGCATAAGGGAATACATGCACAAGGTGGAGTTGGAGCTCTCGAAAATTTGCAGTGACATTATGATTGTCTTAGATGAGCATCTTATCCCATCCACTAATGTTGCTGAGTCCACTGTTTTTTACTATAAAATGAAAGGAGACTACTATCGGTATTTAGCGGAATTTAAAGATGGTGATGAGAAAAAAGAGGTGGCAGATCAGTCACTTAAAGCATATGAGGCAGCTGCTACAACTGCCGAGAGTGAATTACCACCTACGCATCCTATCCGACTGGGTCTAATTCTAAATTTCTCAGTGTTTTATTATGAGATAATGAATTCACCTGAAAGGGCATGCCACCTTGCGAAACAAGCCTTTGATGATGCTGTTTTGGAGCTGGATTCCCTGAATGAGGACTCTTACAAGGACAGTACCTTGATCATGCAACTTTTAAGAGACAACCTTACTTTGTGGACTTCTGATGTCCCAGAAGATAGTGATGATCAAAAGTTGGAAAGCACAGCCAAGGGTGGTCAAGCAGAAGATGAGGAAGCAAAGGCACCCTCTCAGtgttaccatgCTCATAGAGTTAAAGCAGGAAAATCTGAAGATGATAAGAGACTCGCATTCGTCATTAATAAAAACCAAGAAGTATGTGATGATTTCGATGGAGTCAAAGTGAGGAAACACAAAGAGAAGATCTTGAATTCTTACTTGCCTTATGTGTTGGAAAGAGGAAAAGCCATCAAAGAAGGTAACTTGGTTGCCAAGCTTCACAAACATGAATGTGAAGGTTATTGGAAAAGAGAAGCTATGAATTTCAATCACCCCATAAGTTTCAAGACAATTGCAATTGATTCTAAGCTTAAAAAGGAAATAATTGATGATTTGGACAAGTTTTTGAATGGCAAAGAGTTCTATGAAAAAACTGGGAGAGCTTGGAAAAGAGAGTACTTGCTTTATGGTCCTCCAGGGACCGGCAAGTCTAGCCTCATCACGGCCATGGCCAATTATCTTAACTATGATATCTATGATCTAGATCTCGCTGGTGTAGATGACAATTTGGACTTGAAGAATCTAATGCTTCGGATGAATAACCTTTCCTTACTTGTTGTGGAAGATATTGATTGCAGTATAGAGCTGCAGAACAGAGAAGAAGGAGAAGAAAATAAGGTAACACTTCCAGGGCTATTGAATGCAACAGATGGTCTATGGTCATGCTGCAACGAGGAACGAATCATCGTGTTCACGACAAATCATAAAGAGAGGCTTGATCCTACTCTTCCAAGGCCTGGAAGAATGGACATGCACATTCACTTGTCATACTGCACTTTCTCTGCTTTTAAACAATTGGCATTCAACTACCTTGGAATCTCACATCACAATCTCTTTCAAGAGATTGAAGGGCTCTTAGGAGAAGTGCGGGTTACTCCAGCAGAAATTGCAGAAGAACTAACAAAAAAAGATCAATTTCAAAGAGCCCTTGCAAGAATTTGTCAATTTCTTGCATAA 1743 0.4114 MASSSKDRENFVYIAKLAEQAERYDEMVVAMKKVAKLDVELSVEERNLFSVGYKNVVGSRRASWRILSKIEQKEESRGNEVNAKRIREYMHKVELELSKICSDIMIVLDEHLIPSTNVAESTVFYYKMKGDYYRYLAEFKDGDEKKEVADQSLKAYEAAATTAESELPPTHPIRLGLILNFSVFYYEIMNSPERACHLAKQAFDDAVLELDSLNEDSYKDSTLIMQLLRDNLTLWTSDVPEDSDDQKLESTAKGGQAEDEEAKAPSQCYHAHRVKAGKSEDDKRLAFVINKNQEVCDDFDGVKVRKHKEKILNSYLPYVLERGKAIKEGNLVAKLHKHECEGYWKREAMNFNHPISFKTIAIDSKLKKEIIDDLDKFLNGKEFYEKTGRAWKREYLLYGPPGTGKSSLITAMANYLNYDIYDLDLAGVDDNLDLKNLMLRMNNLSLLVVEDIDCSIELQNREEGEENKVTLPGLLNATDGLWSCCNEERIIVFTTNHKERLDPTLPRPGRMDMHIHLSYCTFSAFKQLAFNYLGISHHNLFQEIEGLLGEVRVTPAEIAEELTKKDQFQRALARICQFLA 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01577 580 CDD AAA 395 519 - -
Aip08g01577 580 ProSitePatterns 14-3-3 proteins signature 2. 218 237 IPR023409 -
Aip08g01577 580 Gene3D - 1 251 IPR036815 -
Aip08g01577 580 PANTHER 14-3-3 PROTEIN 3 260 IPR000308 -
Aip08g01577 580 SMART AAA_5 392 521 IPR003593 -
Aip08g01577 580 Gene3D - 343 515 IPR027417 -
Aip08g01577 580 PRINTS 14-3-3 protein zeta signature 182 208 IPR000308 -
Aip08g01577 580 PRINTS 14-3-3 protein zeta signature 209 238 IPR000308 -
Aip08g01577 580 PRINTS 14-3-3 protein zeta signature 155 181 IPR000308 -
Aip08g01577 580 PRINTS 14-3-3 protein zeta signature 40 69 IPR000308 -
Aip08g01577 580 PRINTS 14-3-3 protein zeta signature 89 113 IPR000308 -
Aip08g01577 580 PRINTS 14-3-3 protein zeta signature 120 142 IPR000308 -
Aip08g01577 580 MobiDBLite consensus disorder prediction 240 264 - -
Aip08g01577 580 Gene3D - 516 580 - -
Aip08g01577 580 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 310 564 IPR027417 -
Aip08g01577 580 Pfam 14-3-3 protein 15 236 IPR023410 -
Aip08g01577 580 MobiDBLite consensus disorder prediction 239 264 - -
Aip08g01577 580 Pfam ATPase family associated with various cellular activities (AAA) 396 518 IPR003959 GO:0005524|GO:0016887
Aip08g01577 580 SMART 1433_4 8 249 IPR023410 -
Aip08g01577 580 PANTHER GENERAL REGULATORY FACTOR 2 3 260 - -
Aip08g01577 580 SUPERFAMILY 14-3-3 protein 7 238 IPR036815 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01577 Aip-Chr8 27898955 27905484 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01577 4 260 14-3-3 family AT2G42590 74.517 2.79e-138 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01577 K06630 - gmx:547574 441.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01577 08 27898955 27905484 Aip08g01577 08 27898955 27905484 ECH