Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01557 ATGGGAACACCCTTCAAGCCAATACCGAGCACAAGAAGAAGCACATACTATAGACTAGAAACCAAGAACTTATCTTACAAATTGTGCAGCCAATTTGATGAGTTTAGAAGCCTTTGTTTCGGGTCGAATCGGAGGAGGAGGAGCAGCGCAGGGAAATACATTTTGAAGGATGTTACTTGTGAAGCAAGGCCAGGGGAGTTGACAGCCATTGCTGGCCATAGTGGAGCTGGAAAAACCACCCTGCTTGAAATCCTTGCTGGGAGAATATCTCCCGGTAAAGTTTCCGGCCAATTGCTGGTGAATCATCGGGCGATGGATCCGAACCGGTTCAGAAGAATGTCAGGTTATGTGACACAGGAAGATGCTCTGTTTCCATGTCTTACAGTGAGAGAGACACTCATGTATAGTGCTATGCTGAGGCTTCCCGGGGGCAAAAAAGTGGCTGCTACAAGAGTTGAGGAGTTGATGAAGGAGCTTGGGTTGGATCATGTTGCGGATTCAAGAATTGGTGATGGATCAAGCCATGGAATTTCGGGTGGCGAAAGGAGGAGAGTCTCTATTGGTGCTGATTTAGTTCATGACCCTGCAGTTATCTTGATTGATGAACCAACTTCAGGGTTGGATTCTGCTTCAGCTCTTAATGTAATCTCATTGCTTAGACTAATGGCATTCAATCAAGGAAAGACTATTGTTCTGACTATCCACCAACCTGGTTTTCGCATCTTGGAGCTTCTTGATGGCCTCATTTTGCTCGCGGATGGATTCGTCGTGCACAATGGTTCCTTGAGTCTTCTTGAGGCTAGGCTCAGGTTATCCGGCCATCAAATTCCGCGTCGCGTCAATGTCCTTGAATATGCACTTGATGTCATGGAAAGCTTGGTTATTCATACATCATCAGAATCTGAGGACAATCAATATCTTCTTAGAGACAGAGAGTATGAAGATCACAGGATGAGAATGCATTGTTCCAAGATTGCTAAAGAAAAGGCTCTCTTGTACTCGAATTCTCCTATGGAAGAGATTCTAATCTTAGGAAGAAGATTTTGCAGCAATATATTCAGAACTAAGCAACTCTTTCTCACCAGAGTTATACAAGCCTTAGTAGCTGGATTCATTCTTGGAACTATATTCTTGAATACAGGTAGCAAGCAAGGTCAATTAGCATTGCAAACGCGAAGCGGCTTCTTCGCTTTCAGCCTTACCTTTCTGTTATCTTCGACGACAGAAGGCTTGCCAATTTTCTTGGAAGAGAGAAGAACTTTGATGAGAGAGACCTCAAGAGGAGCTTATAGAGTTTCTTCCTATGTTCTTGCAAATACACTTGTTTTTCTTCCTTTCCTTCTAATGGTTTGTGTTCTATATACCACCCCGGTTTATTGGCTTGTAGGATTAAGGAAAGACATTGATGCATTCCTCTACTTCTCTGTAGTTGTTTGGTTGGTCCTCCTCATGTCGAACTCTCTTGTGGCGTGTTTCAGCGCTCTTGTGCCGAATTTCATCCTTGGAAACTCAGTGATCGCAGGCCTAATGGGGTCTTTCTTTCTGTTTTCGGGGTATTTCATATCGAAGGAGAAGATGCCTAGCTACTGGATTTTTATGCACTACTTGAGTTTATTCAAATACCCTTTTGAGTGTCTTATGATAAATGAGTATGGAGAAGAGCAAGGAAGAAGAAGATGCCTAGAAACTAGGAATGGAGAATGCATATTGCATGGAGTTGAGTTCTTAGAACAACAGGGTTTGAAGGAGTCAAAAAAGTGGACCAATTTGGTTGTAATGTTGGGGTTCATAATAGGGTATAGAGTTCTTTGCTTTTGTATTCTTTGGTTCAGATGTTACAGAACCAGAAACTGA 1854 0.4283 MGTPFKPIPSTRRSTYYRLETKNLSYKLCSQFDEFRSLCFGSNRRRRSSAGKYILKDVTCEARPGELTAIAGHSGAGKTTLLEILAGRISPGKVSGQLLVNHRAMDPNRFRRMSGYVTQEDALFPCLTVRETLMYSAMLRLPGGKKVAATRVEELMKELGLDHVADSRIGDGSSHGISGGERRRVSIGADLVHDPAVILIDEPTSGLDSASALNVISLLRLMAFNQGKTIVLTIHQPGFRILELLDGLILLADGFVVHNGSLSLLEARLRLSGHQIPRRVNVLEYALDVMESLVIHTSSESEDNQYLLRDREYEDHRMRMHCSKIAKEKALLYSNSPMEEILILGRRFCSNIFRTKQLFLTRVIQALVAGFILGTIFLNTGSKQGQLALQTRSGFFAFSLTFLLSSTTEGLPIFLEERRTLMRETSRGAYRVSSYVLANTLVFLPFLLMVCVLYTTPVYWLVGLRKDIDAFLYFSVVVWLVLLMSNSLVACFSALVPNFILGNSVIAGLMGSFFLFSGYFISKEKMPSYWIFMHYLSLFKYPFECLMINEYGEEQGRRRCLETRNGECILHGVEFLEQQGLKESKKWTNLVVMLGFIIGYRVLCFCILWFRCYRTRN 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01557 617 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 2 609 - -
Aip08g01557 617 ProSitePatterns ABC transporters family signature. 177 191 IPR017871 GO:0005524
Aip08g01557 617 SMART AAA_5 64 255 IPR003593 -
Aip08g01557 617 Pfam ABC-2 type transporter 235 306 IPR043926 GO:0140359
Aip08g01557 617 Pfam ABC-2 type transporter 340 551 IPR013525 GO:0016020|GO:0140359
Aip08g01557 617 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 19 278 IPR003439 GO:0005524
Aip08g01557 617 Pfam ABC transporter 55 205 IPR003439 GO:0005524
Aip08g01557 617 PANTHER ABC TRANSPORTER G FAMILY MEMBER 10 2 609 - -
Aip08g01557 617 Gene3D - 34 273 IPR027417 -
Aip08g01557 617 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 50 266 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01557 Aip-Chr8 26893692 26895545 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01557 54 265 Calmodulin-binding Proteins AT2G36910 26.047 4.07e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01557 K05681 - gmx:100776372 969.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01557 08 26893692 26895545 Aip08g01557 08 26893692 26895545 ECH