Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01549 ATGCTATTTCAAAAGGTAGTGGAGTTTGGAATTGAGATACAGACAAAAGATCAGAATGTATCCTGTGTTGCTGCAGATAGAGTCAAGGGAAGAGAACTAAACTGGGAGAAGAGATATGACACTATCATTGGGACAGCTGAAGGATTGGTTTACCTGCATGAGAATTCAAAAACTAGGATAATTCAAAGAGATATAAAAGCCAGCAACATCTTATTGGATGCTAAACTTCGCGCCAAAATTATATGTGACAACCGCTACCCGAAAGCTATTCGCCTCCGGCAGATGAACCTTGGACGACTGGGATCTTTGGATGCACTGAAGATAGGGAAAGTTACATTTGACAGCATAACATTTTCATATTGTACTGATCATGGCAAGAAGTGTAGCCCTTTTCCAATTGCATTAAGAGATATAAAGCAACACGACATTACTCAAAGCATGCGCGGGCTACTGGTTCATTGGCTTGTAGAGATTTGCATAATatag 486 0.3992 MLFQKVVEFGIEIQTKDQNVSCVAADRVKGRELNWEKRYDTIIGTAEGLVYLHENSKTRIIQRDIKASNILLDAKLRAKIICDNRYPKAIRLRQMNLGRLGSLDALKIGKVTFDSITFSYCTDHGKKCSPFPIALRDIKQHDITQSMRGLLVHWLVEICII 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01549 161 Gene3D Transferase(Phosphotransferase) domain 1 22 101 - -
Aip08g01549 161 SUPERFAMILY Protein kinase-like (PK-like) 29 81 IPR011009 -
Aip08g01549 161 ProSiteProfiles Protein kinase domain profile. 1 161 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01549 161 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 26 81 - -
Aip08g01549 161 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 2 26 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01549 Aip-Chr8 26596880 26599088 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01549 26 80 Receptor kinase-like Gene Family AT1G70520 67.273 5.64e-19 80.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip08g01549 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01549 - - ahf:112726979 112.464