Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01525 ATGGCACAGTTGCCTCCTAAAATACCAATAATACCCCAGAATTGGACGCCTTTTCACCTCCAAAGGGCACCACAACCACTATCAAATTCCACAATGTCAAGTTTCATCCCAAATTCAAATGCAACGGCAACGTCTAATAACAATTCTGCATCTTCAGTTCAACCACAGCAATTGTTGTCGTCATCGACAACGTCTTGGGTTGACGAGTTCCTCGACTTCTCGTCATCGCGGCGGGGCGCGCACCGCCGCTCCGCAAGCGACTCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGTGGCGATGCAGCATCCGCCGCCGCTGTCGTCCGCATCCGATCCGTCATCGCCGTCGTCGGACCAGACGAGTAACAACGATGAGAAGCCAGCGGCAATGGCGCTGGACATTGCACCACCATTATTAATGCACGAACATAACGATAATCACGTGATGAAGCTTAAGAATGAAGCGGTTGAGGAGGAAAGCTTCGGCAAAAATGAGGAGGGGGCGGCCCCGTCCTCCTCTGCCACCGGCACCATTGAAACCATCGTTGATCCAAAGAGAGTCAAAAGAATTTTGGCTAATCGGCAATCAGCTCAGAGGTCAAGGGTGAGAAAGCTACAATACATTTCTGAACTTGAAAGGAGTGTAACAACATTGCAGACGGAGGTATCAGCATTGTCACCAAGGGTAGCATTTTTGGACCACCAACGTTTGATTCTTAATGTCGACAATAGTGCATTGAAGCAACGCATTGCTGCTTTGGCTCAAGACAAGATTTTCAAAGACGCTCATCAAGAAGCACTGAAGAAGGAAATAGAAAGACTTAGACAAATCTATCACCAGCAGCAGAACAACAACAACAACAATAATGGCCATTCATCTCTTCATACTCCAACCATGGCATGTAATAATAATATTAATAATGACAATAATAAGGAACAGCTCCTAAGTTGA 1008 0.4296 MAQLPPKIPIIPQNWTPFHLQRAPQPLSNSTMSSFIPNSNATATSNNNSASSVQPQQLLSSSTTSWVDEFLDFSSSRRGAHRRSASDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAMQHPPPLSSASDPSSPSSDQTSNNDEKPAAMALDIAPPLLMHEHNDNHVMKLKNEAVEEESFGKNEEGAAPSSSATGTIETIVDPKRVKRILANRQSAQRSRVRKLQYISELERSVTTLQTEVSALSPRVAFLDHQRLILNVDNSALKQRIAALAQDKIFKDAHQEALKKEIERLRQIYHQQQNNNNNNNGHSSLHTPTMACNNNINNDNNKEQLLS 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01525 335 MobiDBLite consensus disorder prediction 171 196 - -
Aip08g01525 335 MobiDBLite consensus disorder prediction 130 145 - -
Aip08g01525 335 Coils Coil 283 303 - -
Aip08g01525 335 Pfam bZIP transcription factor 204 248 IPR004827 GO:0003700|GO:0006355
Aip08g01525 335 MobiDBLite consensus disorder prediction 20 56 - -
Aip08g01525 335 MobiDBLite consensus disorder prediction 83 153 - -
Aip08g01525 335 PANTHER BASIC LEUCINE ZIPPER 34 1 88 - -
Aip08g01525 335 PANTHER BASIC LEUCINE ZIPPER 34 122 317 - -
Aip08g01525 335 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 207 222 IPR004827 GO:0003700|GO:0006355
Aip08g01525 335 SUPERFAMILY Leucine zipper domain 204 258 IPR046347 GO:0003700|GO:0006355
Aip08g01525 335 CDD bZIP_plant_RF2 205 255 IPR044759 GO:0003700|GO:0006355
Aip08g01525 335 Gene3D - 203 277 - -
Aip08g01525 335 PANTHER BASIC LEUCINE ZIPPER 2 1 88 - -
Aip08g01525 335 PANTHER BASIC LEUCINE ZIPPER 2 122 317 - -
Aip08g01525 335 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 202 254 IPR004827 GO:0003700|GO:0006355
Aip08g01525 335 SMART brlzneu 200 264 IPR004827 GO:0003700|GO:0006355
Aip08g01525 335 MobiDBLite consensus disorder prediction 298 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01525 Aip-Chr8 26130563 26133434 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01525 1 88 bZIP Transcription Factor Family AT3G58120 41.573 4.80e-10 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aip08g01525 bZIP_1 8.6e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01525 - - gmx:100820197 265.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01525 08 26130563 26133434 Aip08g01525 08 26130563 26133434 ECH