Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01516 ATGTCTACATACGAGGATGATATTAAGAATGATTCTGATAATGATTTGGGTGATGATTTCGATTATGAACCGAATGCACACTATGATGTTGAAGATGACGATGTTGATTCGTTGGATTTTACTAGCAAGAGTGAACACGATTGTGATGTAAAACGAATAGCAAATTTAATGGTGGAGGATATTTGGAACCTACAGTTTAGGACAGAGGATGAGGCTTGCCAATTTTATAACGCTTATGCTTGTTGGCATGACTTTGTAATGAGGAAGGATGATGTGGTAAGGGATAAGGAAGGTAAAATTATTTGCAGGCAACTTATTTGCAATAAAGAGGGCTGCAGGAATATGAGGTATCTTGATCTGGATAATAGATCAAGGGAGGCAAGGTCACTAACGCGAATCAAGTGTCCAGCTCGGCTTTAG 420 0.3881 MSTYEDDIKNDSDNDLGDDFDYEPNAHYDVEDDDVDSLDFTSKSEHDCDVKRIANLMVEDIWNLQFRTEDEACQFYNAYACWHDFVMRKDDVVRDKEGKIICRQLICNKEGCRNMRYLDLDNRSREARSLTRIKCPARL 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01516 139 MobiDBLite consensus disorder prediction 1 30 - -
Aip08g01516 139 MobiDBLite consensus disorder prediction 11 30 - -
Aip08g01516 139 Pfam FAR1 DNA-binding domain 74 138 IPR004330 -
Aip08g01516 139 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 34 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01516 Aip-Chr8 26021854 26022273 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip08g01516 FAR1 2.8e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01516 - - aip:107646409 240.35