Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01511 ATGTCATCGACACCACACTGTCGCCATCTCGTCGTCGGGTCTTCTGCGTCCGCCAGTGTCGTCTGTCTCCTTCGTGGCATTGCGTTGTCTGTGCGCCTTCACCGTTGTCGCCTTCACTGCTTATATCTGCTTGCTGCTAGCCCCCAGTCGCTGCCATGCCTCCTCTGTCTGGGTTCCATCTTGACTCCATCGTGTTGTGCCCCCTCTGTGTCTGGTGTTCTTCTTCTATTCTTCCTTTGGTGGGAGAGGGGAGTGTGTGTTGGGGAAAGAGGAGTGGTAGAGATTATTGTTGCTGTTGATATTAAGGCTATTGTTACTGCGAGTGGTAGGGTTGAGGGAGGGAGGGGGGAGAGGGGAGTGTGTGTTGGGGAAAGAGGAGTGGTAGAGATTATTGTTGCTGTTGATATTAAGGCTATTGTTACTGCGAGTGGTAGGGTTGAGGGAGGGAGGGGGGAGAGGGAAGTGTGCGTTGGGAAAGGGGGAGTGGTGGAGAGAGAGAGAGTGGTGGAGGTTGTTGTTGCTGTTGATGTTAAAGTTGTTGTTGCTGTGAATGGTGGTGTTGAGGGAGGAAGGAAAAGTGTACGTTGGGGAGGGGCTTGTGATGCGGCGGGGACTGCGATTAGGGAGAAGTGTGCGTTGGGGATGGGGGCTGCGACAGGGAGGGAGAGGGAAGGGGAGGGAATGTGCGTTGGGGAGGGAACTTTGGGGGTGAGCGAAACTTTTGCAGGTGTAGGAACTGGGAAGAACCCTGGCTCAGTGAAGCGCGCAGAAAACCACATGGTTGCCGCCGGCGAACCCATGAAGAAGAAACCGAAGCAAAACCTACTGAACCCCAATTGGGTTCAACTCCAACAAAAGCTAAAGCTCAATAATAAGTCTTCAAGGACTTACAAAGAAGAAGACACCCCAAAATCAATACTGGGGAAACGTAAAGAGAGCCCGAATGATGAATCCAATGACTCTCAGATTGATCCTCTTATTCCTGTAAATGACGACTCAAGTCTGACAGATGCAGTCGCCATAGATTGTGAAATGGTTGGCGTTGGTCAAGGAAACAAAAGTGCATTGGGAAGAGTAACAATGGTTAATAAGTGGGGAAATGTTCTTTATGATGAGTTTGTTCGGCCAGTAGAACGGGTTGTTGACTTCCGTACTAAAATTAGTGGCATAAGACCTCGAGATTTGAAAAAAGCAATTGACTTTTGGACTGCTCAGAAGAAAGTTGCAGAGTTGATGAAAGGAAGGATCCTTGTTGGTCATGCCTTGCAGAATGATCTTAAGGCGTTGTTATTAAGTCATCCGAAAAAGGACATTCGAGATACCTCCGAGTACCAGCCATTTCTAAACAGGTCAGGTTGTAGAAGAGCGCTGCGGCATCTTGCTGCAGAAATTCTTGGTGCCAAGATCCAATCAGGAGAGCACTGCCCTATACAAGATGCTCGTGCTGCTATGCTGCTTTACCAAAGAAATAGAAAAGAGTGGGAAAGGAGCTTAAGAGATCAGTTTAGGCTCAAAAAGAAGCAAAATAAACGGAAGAATAAAAAGAAACCAAAGAATGAAGATACTTCAAATGCCAACCATGCTATAATTGAATCATAG 1599 0.4797 MSSTPHCRHLVVGSSASASVVCLLRGIALSVRLHRCRLHCLYLLAASPQSLPCLLCLGSILTPSCCAPSVSGVLLLFFLWWERGVCVGERGVVEIIVAVDIKAIVTASGRVEGGRGERGVCVGERGVVEIIVAVDIKAIVTASGRVEGGRGEREVCVGKGGVVERERVVEVVVAVDVKVVVAVNGGVEGGRKSVRWGGACDAAGTAIREKCALGMGAATGREREGEGMCVGEGTLGVSETFAGVGTGKNPGSVKRAENHMVAAGEPMKKKPKQNLLNPNWVQLQQKLKLNNKSSRTYKEEDTPKSILGKRKESPNDESNDSQIDPLIPVNDDSSLTDAVAIDCEMVGVGQGNKSALGRVTMVNKWGNVLYDEFVRPVERVVDFRTKISGIRPRDLKKAIDFWTAQKKVAELMKGRILVGHALQNDLKALLLSHPKKDIRDTSEYQPFLNRSGCRRALRHLAAEILGAKIQSGEHCPIQDARAAMLLYQRNRKEWERSLRDQFRLKKKQNKRKNKKKPKNEDTSNANHAIIES 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01511 532 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 288 515 - -
Aip08g01511 532 PANTHER RNA EXONUCLEASE 4 288 515 - -
Aip08g01511 532 MobiDBLite consensus disorder prediction 291 329 - -
Aip08g01511 532 Pfam Exonuclease 339 487 IPR013520 -
Aip08g01511 532 CDD REX4_like 339 488 IPR037431 GO:0006364|GO:0008408
Aip08g01511 532 SUPERFAMILY Ribonuclease H-like 338 494 IPR012337 -
Aip08g01511 532 SMART exoiiiendus 337 496 IPR013520 -
Aip08g01511 532 MobiDBLite consensus disorder prediction 498 532 - -
Aip08g01511 532 Gene3D - 334 515 IPR036397 GO:0003676
Aip08g01511 532 MobiDBLite consensus disorder prediction 292 318 - -
Aip08g01511 532 Coils Coil 477 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01511 Aip-Chr8 25822616 25838581 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01511 339 497 C2H2 Transcription Factor Family AT5G40310 35.632 2.19e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01511 K18327 - gmx:100811497 420.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01511 08 25822616 25838581 Aip08g01511 08 25822616 25838581 ECH