Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01508 ATGGACGACTTCCTCGCTCTTATTTGCCCTAATTCTCCATTCATATGGAATGGAAAGAGATACTCATACTGTTTTGAAGACATTCTTTTAGGCATTGGATTGAATATAGTGACTACTATTATTATTGTTGTGCTTGGATTTAAGCAGAAGAGTGGTCGAGGAGTTCACGGATCGGATGTGCAGATGACTGTTCCAGAGAAATCGGTTCTTTATTTTGTACCAGCTATTGAAGCATGCCTTTCAGTCCTGGAAATTATTTTTGTGTGGAAGAAAGAACATAATAGTCAGTTTGTTGGATATCATAAGTGGTTTTATAGCTGTTCTGAATTGATTGTGTGGACAAATATCATTCTCTTCTCAAAGCGTGCCAGCAGTCATTACATAATCTTCAGTCGTGTTTTATGCTTCTGGTGGATTCTGAAACCAATTTTGGGGGTCCTCCGTTTGGTGACTACATTCCCATCATTGGAGGTTTCAGTTTGCATCGTGGAAAGCTTAGTTGTTCTCTTGAGTATCACGTATGGCACAGCTATAAATGTGATTAGGGTGAAGAGAGAGTCTTTCAAAAGAAGTTTATTGGGAGATCCACTTCTTTCCTATGACTCAAGCCTTGAGGAGGGTGGCCATCATGACCTTGAAACTAATGAGAGCATTTGGGATTTGATGACTTTCAAATTCATAGCGCCAGTAATGAACCGGGGGGTGGTAAAGCAATTAGACTGTGAAGATCTGCTGCAGATACCTACTAATATGGCTCCATCTTCTTGTCATGATATAATTTCATCCTGCTGGCAAGCTCAATTGACTAATGATGCTTCAAAGCCATCCTTGTTTAGAGCACTCTGTAGTGCCTATGGATGGTCATATCTCTACCTGGGTTTGTTAAAGGTGATTAATGATTGTATTGGTTTTGTGGGACCATTGCTTCTCAATAAGCTAATCCAGTTTCTTCAAAAAGGCTCAGTGACCTCTGATGGGTATTTACTTGCAGTATCCTTGGGCCTGACCTCTATAATTAAATCCTTTTTGGACACACAATATTCTTTTCATCTTGCCAAATTGAAGCTAAAGCTGCGATCCAGCATCATGACTTTAATATATGACAAGTGTCTACATGTGAACCTAGCAGAGCGTTCAAAATTCACAAATGGAGAAATTCAGACATTTATGTCAGTAGATGCTGACAGAACTGTCAACCTGTGTAATAGTTTCCATGATACATGGAGCTTGCCTTTACAAATTGGAGTGGCACTTTATCTTTTATATACTCAAGTCAAATTTGCTTTTGTATCTGGATTAGCTATAACCATTTTACTGATACCAGTGAATAAATGGATATCACAATTAATTGCAATTGCCACTGAACAAATGATGAAGGAGAAGGATGAAAGGATTCGTAGAACAGGAGAACTTTTGACCTATATTCGCACTTTGAAGATGTATGGATGGGAACTTATTTTTTCTAGTTGGTTGATGGAGACAAGATCTTTGGAAGTGAAACACCTAGCTACTCGGAAGTACTTGGATGCATGGTGTGTATTCTTTTGGGCTACCACACCAACACTCTTTTCTATTTTCACATTTGGACTCTTCACACTGATGGGAAATCAACTTGATGCCGCAATGGTTTTCACTTGTCTTGCTTTGTTTAACACACTGATATCGCCATTGAATTCATTTCCATGGGTGATTAATGGATTGATTGATGCCTTTATATCCTCTAGAAGGTTGAGTAGATTTCTTTCTTGTCCTGAGCATAGATCCAATGTGGGAGACACCGGTTCCAGTTCATCATCTTTCTTGAGTAAACAACCTGATTCTTCACAAAGATTGGCTATCATTGTCCAAGATGTATCTTGTACCTGGTCAAGCAGTGATGAACCACCATTAAATATGGTGTTGAGTCATGTGACTCTAAGCCTGTCCAAGGGTTCCTTTGTTGCTATTATTGGAGAGGTTGGTTCTGGTAAATCTTCCTTGTTATATTCAGTTCTTGGAGAAGCGCAACTTGCTCATGGATATATTTATTGTGATGGATCCGTGGCATATGTACCACAGGTCCCCTGGATTTTATCTGGTACTGTACGTGACAACATACTATTTGGGAAAAGCTATGATCCTGTAAGGTATACAGATACACTGCAGGCATGCGCATTAGATGTTGATATTGAATTGATGGTTGGACATGACATGGCGTATATTGGAGAGAAAGGACTAAATTTATCTGGTGGACAGAGAGCTCGACTTGCTTTGGCGAGGGCAGTGTATCATGGCTCAGATGTTATTATGCTTGATGATGTTCTGAGTGCAGTTGATGCACAAGTTGCTCACTGGATTTTACACAATGCCATTCTCGGCCCTCTTATGCAAGGAAAAACTATATTGCTCTGTACTCACAATGTGCAGGCAATATCTTTAGCTGACATGGTTGTTGTAATGGACAAGGGGCATGTAAAATGGTTGGGAAGTTCAGCTGCCTTTCCAATTTCTTCATACACAAGATTCTCCCCATCGAATGATATTGATTTAACTTCAAAAAATCACAGAGAATCTTGCAGCTCAGATTCTTCATCCAAACCTAAGGAGCAATCTCTTCCTGAAAAAGAAATTGTGCATTCTCCGGAGATAGCAGAGGAGATAGTTGAAGTTGAGTTAAGGAAAGAGGGAAAAGTTGAAATTGGAGTGTATAAGAACTATGCTGTCTTCATTGGTCAGTTTGTTACAGTTGTTATATGCCTGTCAGCTATCCTCATGCAAGCATCTCGGAATGGAAATGATTTATGGCTATCATATTGGGTTGATACAACAGAAACTGGTCAAACAGTGCACTCTGTGTCCTTCTATCTGGCTATACTATGTCTATTTTGTGCTGTGAATTCCTTTTTCACATTGGTGAGGGCATTCTCTTTTGCGTTTGGTGGATTACAAGCAGCAATTAAGGTACACAATAGACTGCTTAGCAAGCTTATCAATGCACCTGTGCGATTCTTTGATCAGACCCCGGGTGGAAGAATACTGAACAGATTATCTTCAGATCTTTATACAATTGATGATTCTCTTCCATTCATTATGAACATTCTCCTGGCTAATTTTGTAGGCCTGTTGGGCATTGCAATCATTTTGTCATATGTACAGGTCTTCTTCCTAGTCCTCCTATTGCCATTGTGGTATATCTACAGTAAACTACAGTTCTTCTACAGATCCACATCAAGAGAATTACGCCGATTGGACAGTGTTTCTCGTTCTCCAATATATACATCTTTCTCAGAAACACTTGATGGAACTTCAACTATAAGGGCTTTCAAATCCGAGGACTTCTTCTTTGCCAAATTCATTGAACACATCACATTGTATCAAAAGACTTCATACACAGAGACTGTAGCAAGTTTATGGCTTTCCTTGCGTCTTCAGTTATTAGGTGCATTTATCATCTCATTCATAGCTTTGATGGCTGTTGTTGGATCTCATAGAAGTCTGCCTATCAACTTTGGTACCCCAGGGCTGGTAGGATTGGCCCTCTCATATGCAGCTCCTATCGTATCCTTGTTGGGGAGTTTTTTAACAAGTTTCACTGAAACAGAAAAGGAGATGGTTTCAGTTGAAAGAGCACTTCAATACATGGACATTCCTCAAGAAGAACAAGCTGGATGCTTAAATGTGAATCCAGATTGGCCTAACCTAGGAGTTATTGAATTCCAGAATGTCACTTTGAAATATATGCCATCTTTGGCACCTGCAATCTACAATCTTAGTTTTACTATTGCTGGAGGGACACAGGTTGGAATAATTGGAAGAACAGGTGCTGGAAAGTCTAGTGTGTTAAATGCCCTTTTCTGCCTGACCCCAATATGTTCAGGCTCCATTTTAGTTGATGGTACGGACATTAGAAATGTTCCTGTCAGAGAACTGCGTACACATTTGGCTATTGTGCCTCAGAGTCCATTCTTGTTCAATGGATCATTAAGGGAGAACCTAGATCCATTTAAGATGAGTGACGACTTAAAAATTTGGGATGCTTTGGAGAAGTGCCATGTGAAAGAGGAAGTAGAAGAAGCTGGAGGGCTGGATATTCTTGTAAAGGAAGGAGGTATATCGTTTTCCGTTGGCCAGCGGCAGCTTCTTTGCCTTGCACGTGCGCTTCTTAAATCTTCAAAAGTTCTCTGTTTGGATGAATGCACTGCCAATGTGGACATTCAAACTGCTTCGCTTCTCCACACCACCATATCCAGCAAGTGCAAAGGCATGACAGTGATCACAATTGCTCACAGGATTTCTACTGTCTTAAATATGGATAGCATTCTGATTTTAGACCATGGCAACCTGGCTGAACAAGGAAATCCACAGGTTCTTCTGAATGATGAGTCCTCATTATTTTCCAGTTTTGTTAAAGCTTCATCAATGTAA 4404 0.3999 MDDFLALICPNSPFIWNGKRYSYCFEDILLGIGLNIVTTIIIVVLGFKQKSGRGVHGSDVQMTVPEKSVLYFVPAIEACLSVLEIIFVWKKEHNSQFVGYHKWFYSCSELIVWTNIILFSKRASSHYIIFSRVLCFWWILKPILGVLRLVTTFPSLEVSVCIVESLVVLLSITYGTAINVIRVKRESFKRSLLGDPLLSYDSSLEEGGHHDLETNESIWDLMTFKFIAPVMNRGVVKQLDCEDLLQIPTNMAPSSCHDIISSCWQAQLTNDASKPSLFRALCSAYGWSYLYLGLLKVINDCIGFVGPLLLNKLIQFLQKGSVTSDGYLLAVSLGLTSIIKSFLDTQYSFHLAKLKLKLRSSIMTLIYDKCLHVNLAERSKFTNGEIQTFMSVDADRTVNLCNSFHDTWSLPLQIGVALYLLYTQVKFAFVSGLAITILLIPVNKWISQLIAIATEQMMKEKDERIRRTGELLTYIRTLKMYGWELIFSSWLMETRSLEVKHLATRKYLDAWCVFFWATTPTLFSIFTFGLFTLMGNQLDAAMVFTCLALFNTLISPLNSFPWVINGLIDAFISSRRLSRFLSCPEHRSNVGDTGSSSSSFLSKQPDSSQRLAIIVQDVSCTWSSSDEPPLNMVLSHVTLSLSKGSFVAIIGEVGSGKSSLLYSVLGEAQLAHGYIYCDGSVAYVPQVPWILSGTVRDNILFGKSYDPVRYTDTLQACALDVDIELMVGHDMAYIGEKGLNLSGGQRARLALARAVYHGSDVIMLDDVLSAVDAQVAHWILHNAILGPLMQGKTILLCTHNVQAISLADMVVVMDKGHVKWLGSSAAFPISSYTRFSPSNDIDLTSKNHRESCSSDSSSKPKEQSLPEKEIVHSPEIAEEIVEVELRKEGKVEIGVYKNYAVFIGQFVTVVICLSAILMQASRNGNDLWLSYWVDTTETGQTVHSVSFYLAILCLFCAVNSFFTLVRAFSFAFGGLQAAIKVHNRLLSKLINAPVRFFDQTPGGRILNRLSSDLYTIDDSLPFIMNILLANFVGLLGIAIILSYVQVFFLVLLLPLWYIYSKLQFFYRSTSRELRRLDSVSRSPIYTSFSETLDGTSTIRAFKSEDFFFAKFIEHITLYQKTSYTETVASLWLSLRLQLLGAFIISFIALMAVVGSHRSLPINFGTPGLVGLALSYAAPIVSLLGSFLTSFTETEKEMVSVERALQYMDIPQEEQAGCLNVNPDWPNLGVIEFQNVTLKYMPSLAPAIYNLSFTIAGGTQVGIIGRTGAGKSSVLNALFCLTPICSGSILVDGTDIRNVPVRELRTHLAIVPQSPFLFNGSLRENLDPFKMSDDLKIWDALEKCHVKEEVEEAGGLDILVKEGGISFSVGQRQLLCLARALLKSSKVLCLDECTANVDIQTASLLHTTISSKCKGMTVITIAHRISTVLNMDSILILDHGNLAEQGNPQVLLNDESSLFSSFVKASSM 1467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01508 1467 MobiDBLite consensus disorder prediction 843 868 - -
Aip08g01508 1467 Gene3D ABC transporter type 1, transmembrane domain 886 1214 IPR036640 GO:0005524|GO:0016021
Aip08g01508 1467 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1224 1455 IPR027417 -
Aip08g01508 1467 Pfam ABC transporter transmembrane region 291 557 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip08g01508 1467 Pfam ABC transporter transmembrane region 910 1161 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip08g01508 1467 Gene3D - 1215 1465 IPR027417 -
Aip08g01508 1467 SUPERFAMILY ABC transporter transmembrane region 278 585 IPR036640 GO:0005524|GO:0016021
Aip08g01508 1467 CDD ABCC_MRP_domain2 1228 1447 - -
Aip08g01508 1467 ProSitePatterns ABC transporters family signature. 1366 1380 IPR017871 GO:0005524
Aip08g01508 1467 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 294 569 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip08g01508 1467 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 613 840 IPR003439 GO:0005524
Aip08g01508 1467 Pfam ABC transporter 1249 1394 IPR003439 GO:0005524
Aip08g01508 1467 Pfam ABC transporter 634 766 IPR003439 GO:0005524
Aip08g01508 1467 ProSitePatterns ABC transporters family signature. 741 755 IPR017871 GO:0005524
Aip08g01508 1467 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 262 1447 - -
Aip08g01508 1467 CDD ABCC_MRP_domain1 613 816 - -
Aip08g01508 1467 CDD ABC_6TM_MRP7_D1_like 291 577 - -
Aip08g01508 1467 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1230 1463 IPR003439 GO:0005524
Aip08g01508 1467 Gene3D ABC transporter type 1, transmembrane domain 278 585 IPR036640 GO:0005524|GO:0016021
Aip08g01508 1467 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 909 1195 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip08g01508 1467 PANTHER MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 7 262 1447 - -
Aip08g01508 1467 SMART AAA_5 643 817 IPR003593 -
Aip08g01508 1467 SMART AAA_5 1256 1440 IPR003593 -
Aip08g01508 1467 CDD ABC_6TM_MRP7_D2_like 908 1207 - -
Aip08g01508 1467 Gene3D - 588 843 IPR027417 -
Aip08g01508 1467 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 610 825 IPR027417 -
Aip08g01508 1467 SUPERFAMILY ABC transporter transmembrane region 909 1212 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01508 Aip-Chr8 25721153 25740278 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01508 629 862 Calmodulin-binding Proteins AT2G36910 27.344 5.38e-18 88.6