Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01499 ATGCGATTGTCTTCTAAATCTGGTTCTTCATCTAAGCATAAGAATGTTGGTAAATCTAGTCCGTGGCTTCGGAAGAAGCACAAGAGGTTAGACGCGATATGTGAGAAGGAGTACAATCGGAACCATGGTGATTCCAATGGGTGTGATGATAATTTGATTACTGATGCTGCGGATTCAGCGGTTCGCCGAAGCTCCCGTGTTCGGCGTGCCCCGGTTCTGCTGGATGCCTCTCCTGCTCCTCCCAAGAAACGGCGGAAGTTAGGGAAGGTTGGAGTGCCTGCAGGGCGCATAGAGAGTGGCAAGAAGAATTTGGAGCAGCAGAGTCCCGGCAGCAGCATTGAGGGGAGTCCTTCGGCTTGGAGATCGAGGTTGAGGTCTAGGGCTAGGGGTGCAGGTTTTGAGGTCAATGATGAGAAGGAATTGCCCCGTCGGAAGAGGAAGCTTTTTGAGGATGTGGTTGTAAGTAGGGGTGATGATGAATTGAAGGTTGATAAGAAGAAGGAATTGGAAGGTGGAGTGCCAAGGATTGTTAAGTCAAAGAGACCAGCGAGGATCAAAGCTACAAAGCATGAAGAAGAGCTTAAAGTGAATGAGTCTCATGAAGTAGGGCCTAAGGAGAACGAATCTCATGAAGAGGGGCTGAGAGAGAATGAATCTCACACGGAAACGCTTAGAGAGAATGAATCTAATGAGGAAGAGCTTCAAGAGAATGAATCTTTTGTAGCAAAGCAGACAGAGAAGGAGTCTTATGAAGGGCATAGAGAGAATGAGTGTCATGGTAATTTAGATGAGAGCAACAGTCAAGAAGTGGAGCTTACAGTGAACAAAGAGGAGGGTAATGATACGGTTCCAGTAACTGATGTGTCTGGCGGGAGCCTTGTAATTATATTGGATGTGAATGAACCTCCTATTATACGGAATGGGGAGAGAAACATGTCAAACAATTTGCAAACGGAGGAATGTAGTGGCGGTAGTGAACAGTCTCCTTTGGAACATGCAGATAAACCGGATGATCGATCGGAACATGCAAATAAACAGGACGATCAGTTAGCATGTGAGAAGGAAGGCAATAATGCAAGTGAAGGAGCTGAAATTGCTGGGATTTCAACAAAGCAAGTAGAAAATGAAGGATCAGCTGACAAGGAGGTTGAGATTGATGAAAACACTTTGAAAGATGCAAACTATGTGACAAAGGATAAGCTGAAACAAGCTTCAAATGGCTCCCAACGGATCAAAGAGGGTCGACGGTGTGGATTGTGCGGGGGAGGCACTGATGGTAAGCCTCCTAAAAGGTTGCTTCAGGACAATGGTGAGAGTGAGAATGAAGCATATAGCGGTTCTTCGGCTTCAGAAGAGCCTAACTTTGATATCTGGGATGGTTTCAGTGATGAACCTGGCTGGCTTGGTCATCTCTTGGGTCCTATTAATGATAACTTCGGCATTGCTCGAATATGGGTTCATCAGCAATGTGCTGTATGGAGTCCAGAGGTTTATTTTGCTGGGTTGGGATGCTTGAAGAATGTCAGGGCTGCACTTTACAGAGGAAGAGCATTGAAGTGCACACGTTGTGGGAGGCGAGGGGCAACCTCAGGTTGTCGTGTTGATCGTTGTCCAAAAACTTATCACTTGCCTTGTGCAAGAGCAAGTGGTTGCATCTTTGATCACCGTAAATTTCTTATTGCCTGCACAGATCATCGGCATCTTTTCCAACCACATGGTAGTAAATATTTAGCCCGGATAAAGAAGTTGAAAGCTAGGAAACTGAAGTGGGATATGAGGAAGCATTCAAATGATGCTTGGAGAAAGGATATTGCTGCAGAAGAGAGATGGCTTGAAAATTGTGGAGAGGATGAGGAGTTTTTGAAACGTGAGAACAAGAGACTTCATCGTGATTTATTGAGAATAGCACCAGTGTACATTGGTGGTTCAGACTCTGCATGTGAACCATCCTTTCAGGGATGGGAATCTGTTGCTGGACTTAAAGATGTCATCCGGTGTATGAAGGAAGTTGTTATTTTGCCTCTACTATATCCTGAGCTCTTTGATAATTTAGGGCTTACACCTCCCAGAGGTGTTCTTTTGCATGGGTATCCTGGAACAGGGAAAACCTTAGTGGTCCGGGCATTGATAGGTGCATGTGCCCGTGGCGATAGACGGATTGCATATTTTGCCCGCAAAGGTGCAGATTGCTTGGGGAAATACGTGGGCGATGCTGAGCGCCAACTAAGACTATTATTTCAGGTTGCTGAGAGATGTCAACCTTCTATAATATTCTTTGATGAGATAGATGGATTAGCACCTACCCGTACTAGGCAGCAAGATCAGACACATAGTTCTGTTGTATCAACTTTGCTTGCTCTTATGGATGGTTTAAAATCCAGGGGTTCAGTTGTAGTCATAGGTGCAACAAACCGTCCTGATGCTGTTGACCCAGCACTGAGGCGACCTGGAAGATTTGATCGGGAAATTTATTTCCCACTGCCATCAACTGAGGACCGAGCTTCCATTCTGTCACTTCACACTCAGAGGTGGCCTAAACCAATTACTGGGTCCTTGCTTGAGTGGATTGCAAAAAAGACTCCTGGCTATGCTGGTGCAGATCTTCAGGCTCTCTGTACTCAAGCGGCTATCAATGCCTTGAAGAGGAATTTCCCGTTGCAAGAAGTTTTGTCCTTAGCTGAAGAAAAGCATTCTGGTTGGAAGAACCTTAGTCTACCATCCTTTGCAGTGGAGGAGAGGGATTGGTTAGAGGCATTTTTGCATTCCCCACTACCATGCTCCCGGAGAGAAGCAGGAAATGCCACTAATGATGTTGTATGCTCCCCTCTTCCTATCCACCTCATACCTTGTTTATTGGGGCCATTGTGCACACTTCTTGTATCTCTTGATGAAAATCTATGGTTGCCACCTCCTTTATCTAAAGCTGTAACAGTGATTAAGAATGAAGTGGTTTCTGTTCTAGACAAAAGGAAAATGCCTATTGATCACTGGTGGTTGCACATTGATGACTTACTGCAAGAAACAAATATTGCTTCTGAGATAAAGAGCAAGCTCATGTGTTTGGGCATTTTATCTGCAAATGATGGCTTTGGTGGTTCTCCTGATACTGCAGATGACACAGATGATAGCACTATGAAGTCTGATCCCTCCATAAAGAATCATTTGGGCATGCGTAGTGGTTTGTTTCTAGACAAGTCATTTGCATTTACTAATAAATCAGGATTTCGAATATTGATTTCTGGAAATCCCCGATCTGGCCAGAGACATCTTGCTTCCTGCTTTCTTTACTGCTTTGTGGGGAGTACTGAAATAAAGAAGATTGATATGGCAACCGCTTCACAAGAAGGGCATGGAGATGTAGTGCAAGGCATTGCACAAATATTATTGAAATGTGCTAGTCTTCAATCTTGCATATTATTCATGCCAAGAATTGATTTGTGGGCTGTAAACAAACATGTCCAAATCTATGATAAGGAAAGTGAGTTTAATACAGAGAAAAGCTCTGCAGAGATTACTGAAGGCAAGGCCAACAAGAAGGCTTCACATGCCTGGATGTCATTTATTGAGCAGGTGGAGTCCATTGGTGTATCGACGTCCTTGATGATTCTGGCTACTTCAGAAGTTTCGTATACAGAACTTCCAAGTAAGATAAGGGAATTCTTCAAGAGTTATCAATCTAAAGACAGCCAATCAACTCCTTTGCAGCAAACAATCCCTCGACTCTCACTGCATCTTGATAGTAATTTTGATAATGAGACGTTGATCACTCTGTCTGTAGAAGAGCTACTGAGAAATTTAGTTGAGCAGCAGATTCAATTGATTCATCAGAGCTCTCATGTTCATCTGGGTGTCCGAAAGGTTTCTGTTGAAGCTTGTGAAGAGAAGGTATGGCAGAGTAAAGATAATGGATCAGTTGATGAAGAGAAGAGTGAAACCCAAGTTCCTAAATCCACATCAGCGCCTCCACCACCACCACCACCCCCCGATGGTAGGTCTCTGAAGGAAAAGTCAACCTTGTCACTAGCAATATCCACATTTGGTTATCAAATTCTTCTATTCCCACATTTTGCTGAACTTTGTTGGGTCACATCAAAACTCAAAGAAGGTCCTTGTGCTGATGTAAGTGGACCATGGAGGGGGGGCTGGCCTTTTAATTCCTGTGTAATTCGTCCCAATAATTCACTAGACAAGTCAATGGTTCCTGGTAGCTCTGGTGGTGTTAAAAGCAAAGAAAGATCTGGTTTAGTTAGAGGCTTGATTGCCGTTGGTTTATTGGCTTACAGGGGTGTTTATAAATCAGCCAAGGAAGTTTCTCTTGATGTGAGGAAAGTTCTTGAGATCCTAATTGAGAATATCAATGCAAAAATTCAAGCTGGGAAAGACAGATATCAATATCTTCGCATTTTATCGCAAGTGGCTTATTTGGAAGATATAGTAAACAATTGGGCTTATGCGTTGCACAGTATGGATAAGGATTCCTTGGAGCCTATATCAAAAGTCATGTCGTCAACTGATGGGTTAAACAGTCATCTCTCGTGTGTAGATCACCAAGCTGAAACTAAGGATGTTCATATGAACGGTGATGATTCGGAGAACCCAGGGAGAAGTTGTAAGGAAATTCATGCTGAAACAACTGGATTTCCTGCCATGAATAAGAAAAATGATAATACAGATAAACTTGATCACGATGGTAGACATACAAATACAAGCTCTAAAGAATGTCTACCAAACGATTCTTTAAACAATCACTCTGATGACTCTGCTGCTGCAAACCAACCTGTTGATCCATCCCCAAATCAGGAGAATGGATTGCTATCCCGTGAGGTTGCCAATGGAGATGTCAGGATGTCAGAAGAATTAGGTAAATCCACATCCACTCATTCTGCTGTCCTTTCAGAGAATGGACTTCACACTGCCTTAGAACAAGAAGGTCTTAATGGAGGTACTGTAAGTACCATCTCTAATCAGCCCCCGACCTTGTCCACAGAAGGGACTGGTGTAACTGATGTTTACTCTCGCAAACATGAGAATGCTACAGGTATTGATATCTCTTCAAGTAAAGGCCATGAGCATGCTGAACCTGCGGTCGTTTGCATGTATCAATGTTGCCCTAGATGTCTTCACAGCTTATATCTTGCAATACGCAAGCTTCTCACCAGTGAGTTGAGCGATAACCATAGAACAGTAGAAGATGTCCATGATGCTGTTTCATCATTATCCGTGGATCTTATTTCAGCAATTAGAAAATGTCACATTGAAGATCTTGATTTTTCTAACAAAACCTTCAAAAGAGAAAGGCATGGAATAACTTTGAACTTGAGAACATGTGACCCCAAAAACCAAGACAAGGACTTTGTGGCAGCTGAGTGTGTTACTCACTCAACAAGCCAGGAGGCAACTGCAACCAAAGATGAGGTAGTGAATGAATCACTGAAGCTTGATTTAAAATTTATATTCAGAGATGGTGTGCTGGTTCCTATGAACCCAGACAAAGATGTTTCTCTTCATTGTAAATTTGAAACTCTGTGCCTTTGTTCTCTTAGAGAGTTGATAGTAATGACCAAGAGCCCTTTTGATTAA 5580 0.4317 MRLSSKSGSSSKHKNVGKSSPWLRKKHKRLDAICEKEYNRNHGDSNGCDDNLITDAADSAVRRSSRVRRAPVLLDASPAPPKKRRKLGKVGVPAGRIESGKKNLEQQSPGSSIEGSPSAWRSRLRSRARGAGFEVNDEKELPRRKRKLFEDVVVSRGDDELKVDKKKELEGGVPRIVKSKRPARIKATKHEEELKVNESHEVGPKENESHEEGLRENESHTETLRENESNEEELQENESFVAKQTEKESYEGHRENECHGNLDESNSQEVELTVNKEEGNDTVPVTDVSGGSLVIILDVNEPPIIRNGERNMSNNLQTEECSGGSEQSPLEHADKPDDRSEHANKQDDQLACEKEGNNASEGAEIAGISTKQVENEGSADKEVEIDENTLKDANYVTKDKLKQASNGSQRIKEGRRCGLCGGGTDGKPPKRLLQDNGESENEAYSGSSASEEPNFDIWDGFSDEPGWLGHLLGPINDNFGIARIWVHQQCAVWSPEVYFAGLGCLKNVRAALYRGRALKCTRCGRRGATSGCRVDRCPKTYHLPCARASGCIFDHRKFLIACTDHRHLFQPHGSKYLARIKKLKARKLKWDMRKHSNDAWRKDIAAEERWLENCGEDEEFLKRENKRLHRDLLRIAPVYIGGSDSACEPSFQGWESVAGLKDVIRCMKEVVILPLLYPELFDNLGLTPPRGVLLHGYPGTGKTLVVRALIGACARGDRRIAYFARKGADCLGKYVGDAERQLRLLFQVAERCQPSIIFFDEIDGLAPTRTRQQDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPDAVDPALRRPGRFDREIYFPLPSTEDRASILSLHTQRWPKPITGSLLEWIAKKTPGYAGADLQALCTQAAINALKRNFPLQEVLSLAEEKHSGWKNLSLPSFAVEERDWLEAFLHSPLPCSRREAGNATNDVVCSPLPIHLIPCLLGPLCTLLVSLDENLWLPPPLSKAVTVIKNEVVSVLDKRKMPIDHWWLHIDDLLQETNIASEIKSKLMCLGILSANDGFGGSPDTADDTDDSTMKSDPSIKNHLGMRSGLFLDKSFAFTNKSGFRILISGNPRSGQRHLASCFLYCFVGSTEIKKIDMATASQEGHGDVVQGIAQILLKCASLQSCILFMPRIDLWAVNKHVQIYDKESEFNTEKSSAEITEGKANKKASHAWMSFIEQVESIGVSTSLMILATSEVSYTELPSKIREFFKSYQSKDSQSTPLQQTIPRLSLHLDSNFDNETLITLSVEELLRNLVEQQIQLIHQSSHVHLGVRKVSVEACEEKVWQSKDNGSVDEEKSETQVPKSTSAPPPPPPPPDGRSLKEKSTLSLAISTFGYQILLFPHFAELCWVTSKLKEGPCADVSGPWRGGWPFNSCVIRPNNSLDKSMVPGSSGGVKSKERSGLVRGLIAVGLLAYRGVYKSAKEVSLDVRKVLEILIENINAKIQAGKDRYQYLRILSQVAYLEDIVNNWAYALHSMDKDSLEPISKVMSSTDGLNSHLSCVDHQAETKDVHMNGDDSENPGRSCKEIHAETTGFPAMNKKNDNTDKLDHDGRHTNTSSKECLPNDSLNNHSDDSAAANQPVDPSPNQENGLLSREVANGDVRMSEELGKSTSTHSAVLSENGLHTALEQEGLNGGTVSTISNQPPTLSTEGTGVTDVYSRKHENATGIDISSSKGHEHAEPAVVCMYQCCPRCLHSLYLAIRKLLTSELSDNHRTVEDVHDAVSSLSVDLISAIRKCHIEDLDFSNKTFKRERHGITLNLRTCDPKNQDKDFVAAECVTHSTSQEATATKDEVVNESLKLDLKFIFRDGVLVPMNPDKDVSLHCKFETLCLCSLRELIVMTKSPFD 1859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01499 1859 PANTHER AAA DOMAIN-CONTAINING 58 1855 IPR045199 -
Aip08g01499 1859 MobiDBLite consensus disorder prediction 61 287 - -
Aip08g01499 1859 MobiDBLite consensus disorder prediction 1554 1569 - -
Aip08g01499 1859 MobiDBLite consensus disorder prediction 127 177 - -
Aip08g01499 1859 MobiDBLite consensus disorder prediction 330 354 - -
Aip08g01499 1859 SMART AAA_5 688 829 IPR003593 -
Aip08g01499 1859 MobiDBLite consensus disorder prediction 1298 1313 - -
Aip08g01499 1859 Pfam AAA+ lid domain 853 885 IPR041569 -
Aip08g01499 1859 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 462 568 IPR013083 -
Aip08g01499 1859 MobiDBLite consensus disorder prediction 1317 1331 - -
Aip08g01499 1859 Gene3D - 653 827 IPR027417 -
Aip08g01499 1859 CDD AAA 686 827 - -
Aip08g01499 1859 Gene3D - 828 888 - -
Aip08g01499 1859 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 654 885 IPR027417 -
Aip08g01499 1859 MobiDBLite consensus disorder prediction 185 276 - -
Aip08g01499 1859 MobiDBLite consensus disorder prediction 101 119 - -
Aip08g01499 1859 MobiDBLite consensus disorder prediction 1 26 - -
Aip08g01499 1859 Pfam PHD-like zinc-binding domain 487 566 - -
Aip08g01499 1859 Coils Coil 217 237 - -
Aip08g01499 1859 MobiDBLite consensus disorder prediction 1 17 - -
Aip08g01499 1859 MobiDBLite consensus disorder prediction 307 325 - -
Aip08g01499 1859 MobiDBLite consensus disorder prediction 1570 1604 - -
Aip08g01499 1859 Pfam ATPase family associated with various cellular activities (AAA) 692 827 IPR003959 GO:0005524|GO:0016887
Aip08g01499 1859 MobiDBLite consensus disorder prediction 1298 1335 - -
Aip08g01499 1859 ProSitePatterns AAA-protein family signature. 797 815 IPR003960 GO:0005524|GO:0016887
Aip08g01499 1859 ProSiteProfiles Extended PHD (ePHD) domain profile. 428 566 IPR034732 -
Aip08g01499 1859 MobiDBLite consensus disorder prediction 1543 1604 - -
Aip08g01499 1859 MobiDBLite consensus disorder prediction 417 451 - -
Aip08g01499 1859 MobiDBLite consensus disorder prediction 305 383 - -
Aip08g01499 1859 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 58 1855 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01499 Aip-Chr8 25539399 25546842 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01499 654 889 Calmodulin-binding Proteins AT3G56690 41.176 8.38e-46 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01499 - - ahf:112772466 3660.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01499 08 25539399 25546842 Aip08g01499 08 25539399 25546842 ECH