Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01493 ATGGTCGAGATGTTTTCGCAGGCGCAAACCGATTATGCAGACGAGGGGGAAGCCTTGTTTGACCTGGGCACTGACCGTGAAGTTGTGGTTGGAGATTTGGACTGCAATAATGAGGGGGCGTCGGTTGGATATGTAGATATGGGTGGGCTTAGATCAGAAGACGTTCTTCTAATGGAATTTAACACGCCTGAGGAGGCAAGAGGTTTCTATAATAACTATAGCCGCATTAAGGGGTTTGCAACAAGACAAGGAAAGAAGGTAAGAAATATTGTCGGAGACATTGTGAGGTATACTTTTGTCTGCAACAGAGAGGGGTTCAGAGAGAAGAAATGGTTGGAGAAGACTGATAGAAAGAGGGAGCATAAAGTGGTAACTCGCTGTGGTTGTGTGGCCGAGATGAGGATTAAGAGGAAAGACGGTTGCGGAAAGTGGTATGTCTCGCGATTTACCGATGAGCACAATCATGAGCTTCTGCCGGGAAAGTTTGTTGATTTCTTGAGATCACACAGGAAAATTTCAGAGGTTGAGATTGCTCATTTAACCAGCATGCGGGATATAGGAATTAGCATTCCGAAGATCTATGAATCGTTTGCAGCCCAGCTTTGTGGCTTCAACATGGTCACGTTTACGAAGCAAGATATGTATAACGAGGTGAGGAGACAAAGAGCATTGCAGGATGGAGATGTAAATGCGGCCATTCGGTTCCTAGATGGTGTTGGTCGTGTTGATGGGAAGATGTTTTGGAGGCATAGATTGGGTCCTGGACAACACTTGTGCGACTTGTTTTGGAGTGATGGGCGCAGTCAGTATGATTATGGGGTATTTGGTGATGTGCTGGCATTCGATGCGACCTACGGGAGGAACAAATATAATCTACCCGTAGTGGTATTTTCCGGGGTTAACCATCACAACCAGACGTGCGTATTTGCCACGGCTTTAGTGTCATGCGAGTCACAGGAATCTTATGTTTGGGTGCTTGAACAATTTTTGGAGTGCATGGGGGGTGTAGCACCTAAGTCGGTAATCACCGACGGGGATCCAGCAATGCGCATAGCTATTCAAAGGATTTTTCCTACTGCTCATCACCGGTTGTGCGCGTGGCATCTTCTTCGGAATGCGACGTCAAATATTTGTGACCCACGATTCACGCAACTTTTTAAGCATTGCATGTTGGCAGACATCGAGATAGACGAATTTGAGGTGATGTGGGAGGCAATGGTTGAGGAGTGTGGCGTGAGGGAGGTTGAATGGGTACAGGAGTTGTATAGGAAGAAGTATTCATGGGCAACTGCTTATATTAGAGGAAGATTCTTTGCGGGGATTAGAACAACTTCTCGGTGCGAGTCTTTGCATGCCAAACTGGGACGGTTTGTGGAAAGCAGGTATGGCGTGATTGAATTTGTGACGAACTTCCAGAGGTGTGTGGATTTTCTTAGAGACAATGAGGATGAGATGGAATTCCGTTCGTGCTACGGGACTCCGGTCTTGCAAACTCAGTTCATAGAGTTAGAGAAGTTTGGTGCGACACGATTCACGCGGGAGATGTTTTGGAGATATCGTGAGTCGCTAAATCGGTGTGTGCGGGTGAGGATAAACGCTTGTGTTGAGATAGAAGGTGGCCAAACTTTCACTGTCCAGAAGTACCGCAAACCAGGAATGACATGGCAGGTTAAGCACGAGAATACAACGAACACCTTCACGTGCTCCTGTCTGAGAATGGAGTCCTTTGGGCTCCCATGTGTACATATACTAGCTGTTCTGGTGCAGCTTGATGCTGTCGTTATTCCTGATACCCTCGTGCTGCGACGGTGGTCGAAGACAGCAAAGATCGACATGGATCTGGAGAAGTTCCGGTGTCCGTCTGGGGAACCGTCGACAATTTACCGTACTAGGTTGGGTGCATTCTCACAATTGTGTAAGAGGCTCGGAAGGGTTGCTTGCATGAGCGATGAGGACTTCAAGGACATTTCGCAGAAGGTTGTGAACGACACGTTATCTTTGGAAATGAAGTATGGACTTCGAGTGGACAATCCCGTGTCAAATGAACCGCAACGAGGAGGAGTTAAGGATCCAGTTCGTGTGAGAACCAAAGGGACTGGACGTGGCAATCAAGCGTCTCCATCAACCGGTAGGAAGCGACGGAAATGCAGCAGCTGCGGAGGATTGGGCCATCGAAGGACTAGGTGCCCAGGTGTGGGTGCATCAGGGACAACCGGCGTTGAACTTCATGAAGTGGCAGGCACTAGCGCCCAACCGGTTCCGGCAGATGATCCGCCGGAGCAGAGAAGGTCAGGAAAAAGGACATGCAACCTTTCGGAAACCTATCCCAGCTCCCATGATGAAGACACCAACCCATTGATTAATATTTATGACTGCTTGGTGGACAGCAACAGGAAGAAAAACAAAATTGTAAAAGAATGA 2421 0.4791 MVEMFSQAQTDYADEGEALFDLGTDREVVVGDLDCNNEGASVGYVDMGGLRSEDVLLMEFNTPEEARGFYNNYSRIKGFATRQGKKVRNIVGDIVRYTFVCNREGFREKKWLEKTDRKREHKVVTRCGCVAEMRIKRKDGCGKWYVSRFTDEHNHELLPGKFVDFLRSHRKISEVEIAHLTSMRDIGISIPKIYESFAAQLCGFNMVTFTKQDMYNEVRRQRALQDGDVNAAIRFLDGVGRVDGKMFWRHRLGPGQHLCDLFWSDGRSQYDYGVFGDVLAFDATYGRNKYNLPVVVFSGVNHHNQTCVFATALVSCESQESYVWVLEQFLECMGGVAPKSVITDGDPAMRIAIQRIFPTAHHRLCAWHLLRNATSNICDPRFTQLFKHCMLADIEIDEFEVMWEAMVEECGVREVEWVQELYRKKYSWATAYIRGRFFAGIRTTSRCESLHAKLGRFVESRYGVIEFVTNFQRCVDFLRDNEDEMEFRSCYGTPVLQTQFIELEKFGATRFTREMFWRYRESLNRCVRVRINACVEIEGGQTFTVQKYRKPGMTWQVKHENTTNTFTCSCLRMESFGLPCVHILAVLVQLDAVVIPDTLVLRRWSKTAKIDMDLEKFRCPSGEPSTIYRTRLGAFSQLCKRLGRVACMSDEDFKDISQKVVNDTLSLEMKYGLRVDNPVSNEPQRGGVKDPVRVRTKGTGRGNQASPSTGRKRRKCSSCGGLGHRRTRCPGVGASGTTGVELHEVAGTSAQPVPADDPPEQRRSGKRTCNLSETYPSSHDEDTNPLINIYDCLVDSNRKKNKIVKE 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01493 806 MobiDBLite consensus disorder prediction 768 784 - -
Aip08g01493 806 Pfam FAR1 DNA-binding domain 69 159 IPR004330 -
Aip08g01493 806 ProSiteProfiles Zinc finger SWIM-type profile. 553 591 IPR007527 GO:0008270
Aip08g01493 806 PANTHER OS02G0262500 PROTEIN 54 611 - -
Aip08g01493 806 MobiDBLite consensus disorder prediction 676 720 - -
Aip08g01493 806 MobiDBLite consensus disorder prediction 746 786 - -
Aip08g01493 806 MobiDBLite consensus disorder prediction 699 713 - -
Aip08g01493 806 SUPERFAMILY Retrovirus zinc finger-like domains 695 732 IPR036875 GO:0003676|GO:0008270
Aip08g01493 806 Pfam MULE transposase domain 278 372 IPR018289 -
Aip08g01493 806 Pfam SWIM zinc finger 567 587 IPR007527 GO:0008270
Aip08g01493 806 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 54 611 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01493 Aip-Chr8 25317256 25322037 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip08g01493 MULE 3.7e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01493 - - aip:107620408 1088.17