Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01471 ATGGTCATGGAGCTTCTTGATCATCATCGTAGGTCTATAATAATCTGCCTCTTGTTGTTGATTCTGTTCTCAAGACCGTTACAAGGGTACAAATTCTATGTTGGTGGGAAAGATGGTTGGGTTCTGAATCCTTCTGAGAGTTACAACCAATGGGCGGAAAGGAACAGGTTCCAAGTCAGTGACACATTGGTGTTTAAGTACAAGGAGGGATCAGAGTCAGTGTTGGAGGTGAAGAAAGAAGACTATGAGAAATGCAACAAAAAGAAGGCAATAAAGAAACTAGAGGGGGGAGATAGTAGTGAGTTCCAATTTGATAGGTCAGGTCCATTCTACTTCATTAGTGGGAATGATGATAATTGTGAGAAAGGTCAGAAGCTTATTGTTGTGGTGTTAGCTCAAAGACCACCACCACCACCTCCTCAAAATCCACCAAAATGTCCTCCTCCTTCACCAATTCATAATCCTCCTTATGTTACACCAACACCACCACAAGCACCTTCCCCTGTTCCACCATATGTTACCCCAACTCCACCACAAGCTCCTTCTCCCGGACATAACAATCATCATCCCAACCCTCCTTATACCCCAATAGTCCAATTATTCCACCATATGTTACTCCAACTCCACCGCAAGCTGCTCCTTCCCCTGGCCATAACAATCATCATCCTAACCCTCCATACACTCCAATAG 690 0.4406 MVMELLDHHRRSIIICLLLLILFSRPLQGYKFYVGGKDGWVLNPSESYNQWAERNRFQVSDTLVFKYKEGSESVLEVKKEDYEKCNKKKAIKKLEGGDSSEFQFDRSGPFYFISGNDDNCEKGQKLIVVVLAQRPPPPPPQNPPKCPPPSPIHNPPYVTPTPPQAPSPVPPYVTPTPPQAPSPGHNNHHPNPPYTPIVQLFHHMLLQLHRKLLLPLAITIIILTLHTLQ 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01471 229 MobiDBLite consensus disorder prediction 133 190 - -
Aip08g01471 229 Pfam Plastocyanin-like domain 40 124 IPR003245 GO:0009055
Aip08g01471 229 SUPERFAMILY Cupredoxins 29 132 IPR008972 -
Aip08g01471 229 ProSiteProfiles Phytocyanin domain profile. 30 132 IPR003245 GO:0009055
Aip08g01471 229 PANTHER EARLY NODULIN-LIKE PROTEIN 2 15 153 - -
Aip08g01471 229 PANTHER BLUE COPPER PROTEIN 15 153 IPR039391 GO:0009055
Aip08g01471 229 MobiDBLite consensus disorder prediction 133 191 - -
Aip08g01471 229 Gene3D - 29 134 IPR008972 -
Aip08g01471 229 CDD OsENODL1_like 30 131 IPR041846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01471 Aip-Chr8 24431572 24433717 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01471 15 182 Phytocyanin Superfamily AT5G53870 50.575 5.86e-48 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01471 - - aip:107613132 315.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01471 08 24431572 24433717 Aip08g01471 08 24431572 24433717 ECH