Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01468 ATGGAAACAATTGATTCTAATGACGTCCTTTATACACCGAGTGACGACGGAGTCAAGTACGGAGATGCCTTTACAGTAAATGATAAGGGCATACTGAGAAAGGTATTCCAGAGTGAAGACCATGCCTGTGATTTCTATCAGAAGTTGGGAAAATTCCAGGGTTTCGGTATTCGACGGAGCGACATGTTCAAAGATGAAGCTGGTAATTTGATTAGGAAAAGATTATTTTGTAACAAGGAGGGGTTGAGACACAGCAAGCATTATCACCGGGTTGACAGGAAGAGGCCACATAAGCCAGAGACAATGACAAATTTTGAGACAAGGATGTGTATATACTTGGAAAAGAGGAGTAATTTATGGAAAGTTAAGAAAGTCATCACAAAACACAACCATGAGATGACTCACAAAGGCATGGTCCATTTAATCCTAAACTTTCTTTCAATGACGGATGCGGCCAAAGCACAAATTGATGGAATGCAAGGATGCGGGATTTCAACATTGAAGACTATGCAGTATATGGCCAGAATGTTTGGGGGTCCTGAAGAGTTTGAGTTGGAATGGAAAAAGGCCGCAGATGAGTACGGTTTACATGATACTGTGTGGGGGAACCAAGTTTATCGAAAGAAGGAGAAGTGGTGTGATGCCTTTTTACAAGACAAGTTTTGTGTCGGTTATAGAATAACATTCCGATATGAGATGATTAATTCGAAATACCAAAATAATGAGTTGTTGTTGCAATTTAGATCAATTTATGCTGTTCCTATGGTGACAACTTCATTGGAGTCCTTGGAGCGGTGTTCTACTGGTATCTACACCAAGGCTATTTTTAAGGACGTAAAAAAAGAAATAGATGATGTCTTAGCTGATGTCGGAGTGACTAGATCCAACAACAACGGTCACCATAAAGACACCAAGGAGGGTCCAAAAAGTGGCATGTATGTGTGTTGCGGGACATTGGACCTGTTCAGAGTTGAAGGTGGTGAGATTGGCTCTACCCAATATGAAGGGCAGGTTGATGGTGGGGGTTGGAACGCCACCCAGCATCTTGATCACCTTAGGGGGATGAGCCACATGAGTGATGAAATTACTTGGCAATCTGGCAAGCGCTATGTAGGAGGTAATGTACTATTTACGGGAGCCGATCGTTGTGCACACAAGAGTTTATATACATATATCTACTTGAGTAATGATGGCTCAGGAGAGGCTCTTCTTGGTTGGCCCATCAACGTGCTTCTTCTTGTCCTTTTTATCAGACACCCTGCATCTGGAGTCCCATTCATCCACAGCCATTTGACCAATATTGGTACGAATAGGGTTGTGTCGCCCCATGACGACATCCAAAGCAAGCTGCATCCTAGTTTGTGTGTTGACAACTTGCACAAAAATAACGCCGGAGAATGTCAACTTGCATTATGA 1416 0.4258 METIDSNDVLYTPSDDGVKYGDAFTVNDKGILRKVFQSEDHACDFYQKLGKFQGFGIRRSDMFKDEAGNLIRKRLFCNKEGLRHSKHYHRVDRKRPHKPETMTNFETRMCIYLEKRSNLWKVKKVITKHNHEMTHKGMVHLILNFLSMTDAAKAQIDGMQGCGISTLKTMQYMARMFGGPEEFELEWKKAADEYGLHDTVWGNQVYRKKEKWCDAFLQDKFCVGYRITFRYEMINSKYQNNELLLQFRSIYAVPMVTTSLESLERCSTGIYTKAIFKDVKKEIDDVLADVGVTRSNNNGHHKDTKEGPKSGMYVCCGTLDLFRVEGGEIGSTQYEGQVDGGGWNATQHLDHLRGMSHMSDEITWQSGKRYVGGNVLFTGADRCAHKSLYTYIYLSNDGSGEALLGWPINVLLLVLFIRHPASGVPFIHSHLTNIGTNRVVSPHDDIQSKLHPSLCVDNLHKNNAGECQLAL 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01468 471 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 27 196 - -
Aip08g01468 471 Pfam FAR1 DNA-binding domain 44 134 IPR004330 -
Aip08g01468 471 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 27 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01468 Aip-Chr8 24371756 24376046 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip08g01468 FAR1 4.7e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01468 - K17604 adu:107493380 243.432