Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01443 ATGAAAATTTTATGTAGATTAGATTCAAACACAAGACAAACAGGAGAGATTCTCATCAACGGTCGCAGAGAAGCGCTGGCCTATGGAATCTCGGCATATGTGACACAAGATGATACCTTATTAACAACCTTAACGGTGAGGGAAGCAGTGCACTACTCAGCTCAACTCCAACTACCTGATTCCATGTCCAAGGCAGAGAAAAGAGAGAGAGCAGAAATTACAATAAGAGAAATGGGTCTGCAAGATGCCATTAACACAAGAATTGGAGGTTGGGGCATTAAAGGAATCAGTGGTGGTCAGAAGAGACGTGTGAGCATCTGCATTGAGATCCTAACACGCCCAAGGCTCTTGTTTCTTGATGAACCAACAAGTGGACTTGACAGTGCTGCTTCCTATTATGTCATGAAAAGAATTGCAAACCTTGTTCAGAAAGATGGCATTCAAAGAACCGTTATTGCTTCAATACATCAACCAAGCACTGAAGTCTTTCAACTTTTCCATAACCTTTGTCTTCTCTCTTCTGGTACAACTGTTTACTTTGGACCTGCCTCAACTGCTACTCAGTTTTTTGCTTCCAATGGTTTTCCATGTCCTGCACTCCAAAACCCTTCTGATCATTTACTGAAAACTATAAACAAGGATTTTGATCAGGATACTGACATGGGTTTATCTGGCACTAGAACAGTGCCTACAGAAGAAGCAATTAGAATCCTTATAAGCGCATATGAATCATCTGAAATTAACCAACAAGTTCAACAAGAAGTTGCAATGCTATCTAACCAGGAGACTAGATCAGTAGATCATAAGAAGAGAAGGCGTGCTGGTTTCCTTAATCAGTGCATTGTTCTTACCAAAATATCATGCGTGAACATGTTTCGTGATCTAGGCTATTATTGGTTACGTCTTGGAATATACATTGCATTGGCCATAGCCACTGCCACAGTTTTCTATGATCTAGGTACAAGTTTCAGCACAATTCAGGACAGAGGAGCACTTCTTATGTTTGAATCTTCATTCATAACTTTCATGACCATTGGTGGATTCCCTTCCTTTGTGGAGGTCATGAAGGTATTTGAACGAGAAAGATTGAATGGGCATTATGGTGTTGTGGCATTTGTAATTGGGAACACAGTATCTAGTGTGCCGTACTTGGTTCTAGTATCAGTGATTCCAGGAGCCATAGCTTATTACCTTCCTCATCTTCAAAGAGGATTCGACCATTTTGTTTACTTCATATGTGTTCTGTTTTCTTGCCTCATGTTGGTTGAAAGCCTAATGATGATAGTTGCAAGCATAGTCCCAAACTATCTAATGGGAATCATAAGCGGCGCCGGAATCCAAGGAATCATGATGCTGGCCGGAGGGTTCTTCAGATTGCCCAATGATCTTCCCAAACCATTTTGGAGATACCCAATGTTCTATGTTGCATTTCATAGATTTGCATTCCAAGGATTGTACAAGAACGAATTTCAAGGGCTAAGCTTTGCAACAAATGATGGAAATGGCTCCTACATTAGTGGTGACCAGATTCTGAGGGACATGTGGCAAGTTGACATGAGTTACTCCAAGTGGGTCGATCTCGGAATCTTGCTTGGGATGATTTTGGTGTATCGAGTGTTGTTCTTCTTGATCATCAAGATTACGGAGAAGTTGAAGCCATTTTTTGTGTCATTCATTTCAGGGTCTCCCAAGCGAGAAACACTAGTGATGGAGAATAATGATGATAACTCTGCACTAAGTCATGAAGCATAA 1752 0.4092 MKILCRLDSNTRQTGEILINGRREALAYGISAYVTQDDTLLTTLTVREAVHYSAQLQLPDSMSKAEKRERAEITIREMGLQDAINTRIGGWGIKGISGGQKRRVSICIEILTRPRLLFLDEPTSGLDSAASYYVMKRIANLVQKDGIQRTVIASIHQPSTEVFQLFHNLCLLSSGTTVYFGPASTATQFFASNGFPCPALQNPSDHLLKTINKDFDQDTDMGLSGTRTVPTEEAIRILISAYESSEINQQVQQEVAMLSNQETRSVDHKKRRRAGFLNQCIVLTKISCVNMFRDLGYYWLRLGIYIALAIATATVFYDLGTSFSTIQDRGALLMFESSFITFMTIGGFPSFVEVMKVFERERLNGHYGVVAFVIGNTVSSVPYLVLVSVIPGAIAYYLPHLQRGFDHFVYFICVLFSCLMLVESLMMIVASIVPNYLMGIISGAGIQGIMMLAGGFFRLPNDLPKPFWRYPMFYVAFHRFAFQGLYKNEFQGLSFATNDGNGSYISGDQILRDMWQVDMSYSKWVDLGILLGMILVYRVLFFLIIKITEKLKPFFVSFISGSPKRETLVMENNDDNSALSHEA 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01443 583 Pfam ABC transporter 2 124 IPR003439 GO:0005524
Aip08g01443 583 PANTHER WHITE-BROWN-COMPLEX ABC TRANSPORTER FAMILY PROTEIN 5 574 - -
Aip08g01443 583 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 5 574 - -
Aip08g01443 583 Pfam ABC-2 type transporter 279 490 IPR013525 GO:0016020|GO:0140359
Aip08g01443 583 Pfam ABC-2 type transporter 156 261 IPR043926 GO:0140359
Aip08g01443 583 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 190 IPR027417 -
Aip08g01443 583 ProSitePatterns ABC transporters family signature. 96 110 IPR017871 GO:0005524
Aip08g01443 583 Gene3D - 1 192 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01443 Aip-Chr8 23539826 23542976 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01443 34 160 Calmodulin-binding Proteins AT2G36910 31.538 3.37e-07 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01443 K05681 - gmx:100813462 893.649