Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01429 ATGTCTCTGCTTCCACCAAGCATGACAATGTTCACCCAATTTCGCCGCGTCAATCTCTTGCTTGGCGTCGAGTTCGCCGTCGACGAGGAAGCCTTGCCACCGTTTCATCAATTCCTTCGCTTACGGTTCTCTCCATCTGTCTCTCTCTTTCTCTCTTGCTCTCTCTCACTTTCTTCTGTTGGTTGCAGGGGAAATTCGGTTGCTAGTTATGCTGGAAACAGGGGCTATCCTCCGAATAAGGTTGTCTGTACTGAAGGACCAGACAGAGTCAGAGAATTAATTGCCATAAGCACTTCATTTGATCATGGAGAAGATGGGAACTTGCCTCTAGTGAGGGAAGGGGGTCATTCACATCGTCGAATTGTTCATGCTGCTGATATGATTGGAAAAGAAATTGAAAGGGCTCTGCTGAAGTCAGTTGTTAATAATCCTAATATTTTTGTGTTTGAACACCATTTCGCTATAGATCTTCTCACTTGTCAGGATGGATTTGATATCACTTGTGTTGGTATTGACACTCTGAATACTGAAACATTAGAGGTGGTAAGATTCCTTTCAAAGGTGACTTTGCTTGCATCTGGTGGAGCTGGACATATTTATCCCAAAACTACAAATCCTCTGGTGGCTACGGGAGATGGAATTGCCATGGCACACCGAGCTCAAGCTTGGTTCAACGATTTCGACGACGAGGTAGTGGTCTTGCAGGCGGCGATGGGTAGCGGCAGTAGCTTCAGGGTTAGCTCCAAGCCTACACCACCGCCGCCGCAAGGAGTGGCATACTGTTGCCGTCCGTCTGTCTATTTAGCTTCCCTCGTGCTCCAAGTCTTCAACTCCCGTTCGCTGTCACCGATCGCAGCTGCTTCCTCGAGCTCGGCGTCCGTCGTCTTTGTCTGCTCAGCCGCGCTTCCGCCGCTGTTGGTTGTCGTTAACGTTCGCGTCTTCGTTCAGCCGTCGTCTTCGTTCGCGTTCTTCGCCGTTCAAGTTTGCTCGACGTTCACCGTTCGCGTTCACTCGCCGTTCACCGTTCGCATTCACGTTTCTCAAATCCTTACATTAATGTTTTGGTATTTACATTTTGCATTTTGTGGATATAACATCTGCAAATTTGACCTGCCATATCTTATTGAGAGAGCTCAAGCCTTGAAAATAGCAGAATTTCCTATTTTGGGCCGTATCAGGAACAGTAGGGTCCGAGTAAAGGATACAACTTTTTCATCTAGACAGTATGGAACCAGAGAAAGTAAAGAAGTTGCTGTAGAAGGGAGAGTTCAGTTTGATCTGCTCCAGGTTATGCAAAGAGACTACAAATTAAGTTCTTATTCTTTGAATTCTGTTTCAGCACACTTTCTTTCTGAGCAGAAAGAGGATGTTCACCATTCTATCATATCTGATCTTCAGAATGGAAATGCAGAAACTAGGAGGCGCCTTGCTGTGTATTGTTTAAAGGTACTTTCTCAACTCCTTAGGAAGGCAAAGCAGAAGAACCTGGTTCTTCCTAATGTAAAACAGGCTGGTTCAGAACAAGGAACATATGAAGGTGCCACTAAGCTCTTCAATGGCGGAGCAGGACCACCTTCCGTTCCCGAAACTTTCCTCTACGAAACCCTTAGTCCCATCTCTTTCTCCGCCGCCACCGCCGACGACGACAACAACAACGAGTCCTACTCTGTCTTCCGCAATGAGATATCCCTCTCTGAAATTCCATCCACCGCTCCAGGTTCCGCTGCTATCGATTTCTTCTCTCTCGACATTGCCAAAGAGACTTCTGATCGGGACTCTCTCCCGCCGATCGTCGTGGCGAAGGAGCCCAAGACGCCAGCACTTGCACCCGAGCCAAAGCTCGAGAGCAGTTGGTTTCGCGGAAATTGCAAGTTCAGGAGCCCCATGCTTCAACTGCATAAAGAGATAGTGGATTTTTGTGAGTTTTTGTCTTCAACATCTGAAGAGAAAGCTGCACGGGACACGACAATAGAATCTGTGTTTGATGTAGAAGTCTTTGGATCTTATAGGACTGGGCTGTATCTTCCGACTATTGATATTGATATTGATGTTGTGATTTTGAAGTCAGGCTTGCCAAATACACAGCTTAGCTTGAATGCACTTTCTAGAGCATTGTCACAAAGGAGCATGGCTAAAAATATTTTAAATAGATTGCTCGTTGTCGTGACAAGTGGCGTGTTGATAGTTGTAGAGGAGCAGCTCGGCAGAGGTGTTTCAGGCGTTGTCGGGGCTAGGAGTTCTTGGAGCCGCGCTAAGTGGTCATAA 2265 0.4675 MSLLPPSMTMFTQFRRVNLLLGVEFAVDEEALPPFHQFLRLRFSPSVSLFLSCSLSLSSVGCRGNSVASYAGNRGYPPNKVVCTEGPDRVRELIAISTSFDHGEDGNLPLVREGGHSHRRIVHAADMIGKEIERALLKSVVNNPNIFVFEHHFAIDLLTCQDGFDITCVGIDTLNTETLEVVRFLSKVTLLASGGAGHIYPKTTNPLVATGDGIAMAHRAQAWFNDFDDEVVVLQAAMGSGSSFRVSSKPTPPPPQGVAYCCRPSVYLASLVLQVFNSRSLSPIAAASSSSASVVFVCSAALPPLLVVVNVRVFVQPSSSFAFFAVQVCSTFTVRVHSPFTVRIHVSQILTLMFWYLHFAFCGYNICKFDLPYLIERAQALKIAEFPILGRIRNSRVRVKDTTFSSRQYGTRESKEVAVEGRVQFDLLQVMQRDYKLSSYSLNSVSAHFLSEQKEDVHHSIISDLQNGNAETRRRLAVYCLKVLSQLLRKAKQKNLVLPNVKQAGSEQGTYEGATKLFNGGAGPPSVPETFLYETLSPISFSAATADDDNNNESYSVFRNEISLSEIPSTAPGSAAIDFFSLDIAKETSDRDSLPPIVVAKEPKTPALAPEPKLESSWFRGNCKFRSPMLQLHKEIVDFCEFLSSTSEEKAARDTTIESVFDVEVFGSYRTGLYLPTIDIDIDVVILKSGLPNTQLSLNALSRALSQRSMAKNILNRLLVVVTSGVLIVVEEQLGRGVSGVVGARSSWSRAKWS 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01429 754 SMART polmehr3 302 715 IPR006172 GO:0000166|GO:0003676|GO:0003887
Aip08g01429 754 SUPERFAMILY FAD/NAD(P)-binding domain 77 228 IPR036188 -
Aip08g01429 754 Gene3D - 77 232 IPR036188 -
Aip08g01429 754 Gene3D - 358 489 IPR036397 GO:0003676
Aip08g01429 754 SUPERFAMILY Nucleotidyltransferase 624 715 IPR043519 -
Aip08g01429 754 Pfam DNA polymerase family B, exonuclease domain 362 445 IPR006133 -
Aip08g01429 754 Gene3D Beta Polymerase, domain 2 647 730 IPR043519 -
Aip08g01429 754 SUPERFAMILY Ribonuclease H-like 360 499 IPR012337 -
Aip08g01429 754 PANTHER DNA POLYMERASE DELTA CATALYTIC SUBUNIT 362 482 - -
Aip08g01429 754 Pfam FAD binding domain 80 226 IPR003953 -
Aip08g01429 754 Pfam Nucleotidyltransferase domain 660 685 IPR002934 GO:0016779
Aip08g01429 754 PANTHER DNA POLYMERASE CATALYTIC SUBUNIT 482 515 - -
Aip08g01429 754 PANTHER DNA POLYMERASE CATALYTIC SUBUNIT 362 482 - -
Aip08g01429 754 PANTHER DNA POLYMERASE DELTA CATALYTIC SUBUNIT 482 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01429 Aip-Chr8 23280920 23294025 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01429 352 517 Core DNA Replication Machinery Family AT5G63960 59.821 4.98e-73 256
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01429 K02327 - aip:107610748 325.479