Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01419 ATGGAGAAGAAAATGGCTGGATTCTGCATCTTTTTCCTCATTCTCTTTCTTGCTCAGGAATATGGCGTGGAGGGAAAGGAGTGTTTGAACCTAAGTGACAAATTCAAGGGACCGTGTTTGGGTTCAAAGAACTGCGATCATCACTGCAGGGACATAGAGCACTTGCTCAGCGGAGTTTGCAGGGACGATTTCCGCTGCTGGTGCAACAGAAAGTGTTAA 219 0.4658 MEKKMAGFCIFFLILFLAQEYGVEGKECLNLSDKFKGPCLGSKNCDHHCRDIEHLLSGVCRDDFRCWCNRKC 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01419 72 SMART gth_4 27 72 IPR003614 GO:0006952
Aip08g01419 72 ProSitePatterns Gamma-thionins family signature. 26 49 IPR008176 GO:0006952
Aip08g01419 72 PANTHER DEFENSIN 1 72 - -
Aip08g01419 72 PANTHER DEFENSIN-LIKE PROTEIN 1 1 72 - -
Aip08g01419 72 SUPERFAMILY Scorpion toxin-like 26 72 IPR036574 -
Aip08g01419 72 Pfam Gamma-thionin family 28 72 - -
Aip08g01419 72 Gene3D - 26 72 IPR036574 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01419 Aip-Chr8 23106187 23107454 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01419 10 72 Plant Defensins Gene Families AT2G02120 35.821 1.44e-07 42.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01419 - - pvu:PHAVU_005G071400g 100.523