Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01412 ATGGGTGAACAATTTAGCAGTCCAGACCCTGTGAATGGTTCTTTGTTTTTATCTGCAGAGTTTATTGGGGTTGAAGATACCTATGCAAGCTATGTGACGTATGCGAAGGGTATTGATTTTGCCATGCAAAAGGGAGATTCTATTAAAGACGAGGAGGAAAATTTTGTCAGGAAGTTTTTCTACTACAATCGGCAAGGGGTGCGGGAAAAGAAGCACTATAAGAGGGTTGACAGAAAAAGACCCCATAAACCGGAGACAAGAACAAATTGCAATACCAAGCTTGTTATGTTTCTGGACAAAAGTTGTGGGAAGTGGCGGATGAAGGCATTGGTTGAGGAACATAATCACGACTTGTCGTCCCCAGTGTTCACTAATATAATGGCACCGCATAGGAAGATCACAGAAGGTCACAAAGCGCATATACATAGCATGCATGAAGCCGGTTTCCATACAACTCAAATCATGGGCTTCTTTGCCCATATGTGTGGTGGATATCACAATCTTAACCTCATAAAGTCAGTTAGCCTCTTTACCGTCGCAGTCATAGCCTCTCCCTTTCCCTCCCTCGCATTCGCAGCCTCTCCCTTTCTCTTCCTTGCTCCCTCGCCATCGTTCACTCAAAGTGCTGCATACACACAACGCCGCTTCGCCGCACACAGTGCTGCTGCGCACAGAGAGCGACTAAGCGAGCCCCTCTTCCTACGCCTTCCATCTCCAACAATTGCAGCGCCGTCGTGCTCTAGTCATCTAGGTTTCATCTCTGGTTTTTGGTTGTTCGTCATTGAAGCCGTGCTGTTCGTCCTCCACTTTGTCTCTGTCATTGAATCCGTGACGTCCCTCTAG 843 0.4698 MGEQFSSPDPVNGSLFLSAEFIGVEDTYASYVTYAKGIDFAMQKGDSIKDEEENFVRKFFYYNRQGVREKKHYKRVDRKRPHKPETRTNCNTKLVMFLDKSCGKWRMKALVEEHNHDLSSPVFTNIMAPHRKITEGHKAHIHSMHEAGFHTTQIMGFFAHMCGGYHNLNLIKSVSLFTVAVIASPFPSLAFAASPFLFLAPSPSFTQSAAYTQRRFAAHSAAAHRERLSEPLFLRLPSPTIAAPSCSSHLGFISGFWLFVIEAVLFVLHFVSVIESVTSL 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01412 280 Pfam FAR1 DNA-binding domain 31 118 IPR004330 -
Aip08g01412 280 PANTHER OS02G0262500 PROTEIN 17 176 - -
Aip08g01412 280 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 17 176 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01412 Aip-Chr8 22963367 22970162 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip08g01412 FAR1 6.8e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01412 - - aip:107610743 363.614