Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01391 ATGTCCATAGAGGTTGGTAAAGATGACTGGTCCTACACATCGTGCAAGACATGTCCGAAGAAGGTTGTAGAGAACAAAGATAGGTGTTGGTGTGATCAATGTAGGCGTGTAGATTTCAAGGCTATACTAAGGTATCGGCTACAAATTATTGTGACTGATGAAAGTGGTTGTATAAAGCTCCTTCTTTGGAACAAAGAAGCAGAGCAAATGGTGGAAAAGGCTACTGTTGAAAAAGTGGAAAAAAATAGTCATACCCTAAATAAGAATGTAAATGCCGTGGAGGGGGTGTATAGCGTCACTAAACTTTCAAATGATGAGTGCCTCATGTCCAATTTTGGTTGTGCTAACTCTTGTGATGCTTCTTTTAATGAAATACTAGCAAATACCCCTATAACTGAAACGAATGATGAAACCAATGGACATGTTGCAGTTTGTCTCTCCAAGGATTCTGCTGTTGAGAGTAATGGCGACAACTCCTATCAAACTCCAGCCAAGAGATCTTGCGCTGATGCATGTGATGGCTCCATGGCAGAAGCACCTGTGTCTGCAAATGTTCAAGCATCGGCGAACAAAACATTCAAGAGGAACTATGGAAAGAAAAAGATGGATTAA 612 0.4085 MSIEVGKDDWSYTSCKTCPKKVVENKDRCWCDQCRRVDFKAILRYRLQIIVTDESGCIKLLLWNKEAEQMVEKATVEKVEKNSHTLNKNVNAVEGVYSVTKLSNDECLMSNFGCANSCDASFNEILANTPITETNDETNGHVAVCLSKDSAVESNGDNSYQTPAKRSCADACDGSMAEAPVSANVQASANKTFKRNYGKKKMD 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01391 203 Gene3D - 1 125 IPR012340 -
Aip08g01391 203 Pfam Replication factor-A C terminal domain 6 84 IPR013955 -
Aip08g01391 203 SUPERFAMILY Nucleic acid-binding proteins 4 81 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01391 Aip-Chr8 22365043 22366114 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01391 12 71 Core DNA Replication Machinery Family AT5G08020 40.984 2.39e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01391 - - adu:107463979 255.758