Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01389 ATGCCTTCCTTGCAGCAGCTCACCTCCATCACATCTCTCATCTTCATAGACCTCCTCACCGGCACAATTCCATCATCATCCCGTCATCGTATAAGCAACAAGTCTTCTCATCTTTGCCGTTCTGAAGTTGTCAGTGCCAAGATGCCGTTCTCCATTGCTGGCAAAAAATGGCGAAACCCTAACACGCACTCCTCTGTCCTCCCACCCACCACTGTCGTCGTCGCCGTCGCCATTGCGCACATCATTTATCACTTTCTTCTTCTCTGGTATGTCATTCTCAATCCACTATTTGCTGCTCAGAACCCAAAATGGCAAAATCTCACTCCAATTTTCCTCTCTCTTTTTCTTCCATCTTCATTCTTCACCCCTCAGATTCATGTTTCTTTCTCTGTCAGCAATAAGAAAAAGTTGAACATGTACGGCAGAAAAGCTTGCGAGCTTGTCAAAGAATTTGCAAGCGTAGGTAAAGGCCAGCTCACACAGTACAATAGTGACCTCTTTGAACAAGTAGTTGCAGAATGCAGCCAGCATCACCTTGAGCTTCAATCTTTGATAAGCAGAAAAATGCAGGAAGAAGGTTTGGATGTCCAAACAGCTAGAAATGCTGACCACTATGGTGCCCTTATCCACCATCTCTCTTTAGTCCGCAATAAGCGCTGTCTAATGGCCTATGTAAATAACCGAGCTGAGATTATAAGAAGCTTGTTGTGGAAGATTGGCAGTGTGCTTCCTAAAGAGATTGAGGAGAAGCTTTCTCACACAGAGGAAGAGTATTTCAACAAGTATTCTGGAGAATTGAAAAAATACATGTCAAAAATGGAGTTAGACCTGACAGTGGATATGGTGCCGCCAAAAGATCCTTACATCAAAGTAAGGGTCCTTGATGACATTGGAGATGGCATTGTGCTTAGCGATAAGACTGCCAATTTTGCTCGTCATTCGATCCACTTTCTGAAGCGAACTGATGCCGAACAATTCATTTCACGGGTTAAGTTGCCATCTAGCCTAAAA 1011 0.4392 MPSLQQLTSITSLIFIDLLTGTIPSSSRHRISNKSSHLCRSEVVSAKMPFSIAGKKWRNPNTHSSVLPPTTVVVAVAIAHIIYHFLLLWYVILNPLFAAQNPKWQNLTPIFLSLFLPSSFFTPQIHVSFSVSNKKKLNMYGRKACELVKEFASVGKGQLTQYNSDLFEQVVAECSQHHLELQSLISRKMQEEGLDVQTARNADHYGALIHHLSLVRNKRCLMAYVNNRAEIIRSLLWKIGSVLPKEIEEKLSHTEEEYFNKYSGELKKYMSKMELDLTVDMVPPKDPYIKVRVLDDIGDGIVLSDKTANFARHSIHFLKRTDAEQFISRVKLPSSLK 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01389 337 SUPERFAMILY GINS helical bundle-like 139 285 IPR036224 -
Aip08g01389 337 Pfam GINS complex protein 190 255 IPR021151 -
Aip08g01389 337 Gene3D - 139 273 - -
Aip08g01389 337 PANTHER PARTNER OF SLD5 139 330 IPR005339 GO:0000811|GO:0006260
Aip08g01389 337 CDD GINS_A_psf1 141 275 IPR005339 GO:0000811|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01389 Aip-Chr8 22298356 22307849 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01389 139 332 Core DNA Replication Machinery Family AT1G80190 65.482 4.42e-92 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01389 K10732 - qsu:112021696 316.235