Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01374 ATGGTGGACATTGAATCTCAAACAAATCATCAAGAAGTGCCTAACAATGTCTTCCACAAGAGAAAAACTCCGGTGACTCTCAAGTTTGAAGATGTCGTGTACAAAATCAAGATTGAGAATGTTGGAATATTGGAGAAGAAGAAAAAGGCATCAGAACGCAAAGTGATATTGAATGGAGTGTCAGGAATTGTTCAACCGGGTGAGATCCTTGCAATGTTAGGTCCGTCAGGAAGTGGCAAGACAACACTGCTGACTGCATTGGGCGGCCGGCTCGGCGGCCGCCTCAAAGGAAAGATAACATACAATGGAGACCCCTTCAGCAATGCCATGAAGAGGAACACCGGCTTCGTCACGCAAGACGATGTCCTACACCCTCATTTGACAGTAACTGAAACCCTTGTTTTCACCGCTCTCCTCCGGCTACCTAACACGGTAGCCAAAGAGGAGAAGGTGGCATTGGCAAAAGCCGTCATGAACCAACTTGGATTGGTCAAGTGTAAGGACAGTATTGTTGGAGGCCCCGGCCTTCGAGGGGTTTCCGGTGGAGAAAGAAAAAGGGTTAGTGTTGGTCAAGAATTGCTCATAAACCCTAGTTTGTTGTTCCTTGATGAACCAACCTCGGGTTTGGATTCAACTACCGCCTTAAGACTTGTATCAACTTTGTTTGATCTTGCAAGAGGAGGAAGAACTATTGTGATGACAATACACCAACCTTCTAGTAGGTTGTACTATATGTTCACTAAGGTGTTGCTCCTTTCAGAAGGGAACACTGTTTATTTTGGAAAGGGTTCGGAGGCATTGGATTATTTCTCTGGTGTTGGATTTTCTCCAGCATTAGCCATGAACCCTGCTGATTTCCTTTTGGATCTTGCTAATGGGATATACACCAACGAATTGAACGAGGATGTTGTGGTGGACAAAAAACAATTGATTCAGGCATACAAGAGCTGTAACGCTGATTCCCAATTGAGGCAAATGGTTCAAGTAACGAATAGCAACTCATCAAGTAGAGTTGAGAACACAGCAGGGTTTGGAAAATGGCCTACAAATTGGTGGCAACAATTCACAGTGTTGTTGAGAAGAGACCTTAAAGAGAGAAAGCACGAGGCATTCGCTTCCTTCAATATTATTCAGGTCGTCTTGACTTCTTTCATTGTAGGACTATTGTGGTACAAGTCTGATACCGCACACATGCAAGATCAGCTTGGACTTCTATTCTTCTTATCAAGTTTCTGGGCATTTTATCCGCTGTACAGAGCAATCTTCGTGTTCCCAGATGAAAGAGTGATGTTGGAGAAAGAAAGATCTTCCGGAATGTACAGACTATCCTCATACTTCATGGCCAAGATGACGGTAGACCTTCCAATGGAACTCGTCCTCCCAACCGTTTCTATTCTCATAACCTACTGGATGGCAGGTCTGAAAGCTACCGCCGCCGCCTTCATCTTCATGCTCCTCACTATCCTCACCCTTGTGTTGGTCTCACAAGGCATAGGACTCGCTCTCGGCGCCTGTGTCCAGAACACCAAAGTGGCCACCACCTTCGCCTCCGTCATAGGGCTAACCTTCATGATAACAAGTGGATTCTTTGTCCAGAATGTTCCCAAATTCATAGCATGGTTGAAGTACATTTCTTTCATATATTACGCCAACGAACTCGTTATATTTTCTCAGTATCGTGAAGGTGAGACTTACAAATGTGGTACGGGTAAGTGCTTGATTTATGAGTACCCTGGAATCAAGGGTTTAGGGTTCGTTAATAATAGAGAGAGTCAATTAAGGGCTTCATTGATTTTGCTAGCAATGCTGTTTTTCTATAGGTTTATAGCTTATGTTGCTCTTATGAGAATTGGAGTCACAAAGAAATCAAAGTCTAGCTAG 1881 0.4397 MVDIESQTNHQEVPNNVFHKRKTPVTLKFEDVVYKIKIENVGILEKKKKASERKVILNGVSGIVQPGEILAMLGPSGSGKTTLLTALGGRLGGRLKGKITYNGDPFSNAMKRNTGFVTQDDVLHPHLTVTETLVFTALLRLPNTVAKEEKVALAKAVMNQLGLVKCKDSIVGGPGLRGVSGGERKRVSVGQELLINPSLLFLDEPTSGLDSTTALRLVSTLFDLARGGRTIVMTIHQPSSRLYYMFTKVLLLSEGNTVYFGKGSEALDYFSGVGFSPALAMNPADFLLDLANGIYTNELNEDVVVDKKQLIQAYKSCNADSQLRQMVQVTNSNSSSRVENTAGFGKWPTNWWQQFTVLLRRDLKERKHEAFASFNIIQVVLTSFIVGLLWYKSDTAHMQDQLGLLFFLSSFWAFYPLYRAIFVFPDERVMLEKERSSGMYRLSSYFMAKMTVDLPMELVLPTVSILITYWMAGLKATAAAFIFMLLTILTLVLVSQGIGLALGACVQNTKVATTFASVIGLTFMITSGFFVQNVPKFIAWLKYISFIYYANELVIFSQYREGETYKCGTGKCLIYEYPGIKGLGFVNNRESQLRASLILLAMLFFYRFIAYVALMRIGVTKKSKSS 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01374 626 Pfam ABC transporter 57 207 IPR003439 GO:0005524
Aip08g01374 626 PANTHER ABC TRANSPORTER G FAMILY MEMBER 21 10 618 - -
Aip08g01374 626 Gene3D - 36 272 IPR027417 -
Aip08g01374 626 SMART AAA_5 66 256 IPR003593 -
Aip08g01374 626 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 10 618 - -
Aip08g01374 626 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 50 270 IPR027417 -
Aip08g01374 626 ProSitePatterns ABC transporters family signature. 179 193 IPR017871 GO:0005524
Aip08g01374 626 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 27 279 IPR003439 GO:0005524
Aip08g01374 626 Pfam ABC-2 type transporter 236 337 IPR043926 GO:0140359
Aip08g01374 626 Pfam ABC-2 type transporter 353 558 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01374 Aip-Chr8 21918887 21922651 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01374 56 240 Calmodulin-binding Proteins AT2G36910 31.414 2.15e-13 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01374 K05681 - gmx:100816135 784.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01374 08 21918887 21922651 Aip08g01374 08 21918887 21922651 ECH