Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01373 ATGTTGCTTGTTGTAGAGTTTTCTTCTGCTGCAGCAGATTCCATTCATTCAGATGAAGATCAGTTTGATGTAATCCCACCAGAAATCGGTTTCGTAAGCTCACTTGGAAAGAAGAAAGAGCTTAAGATAGAAGAGATTGTGACTGAAATGGGTGGTCTTCTACATGCTAAAGCATCACTGGATTTGAACTTTGTTATTGTGAAAAATATTTTGGCTGCAAAATACAAGATTTTGTTAGTATCTAAAACTTTTTCAGGCTTTGGGCCTTGCTTACCAGTGACTGGGCAGTCTTATGGCCGTGCCATCAAGTTGGATGATAAGATGGTCTTTGCTTTGGTTGAAAGCCGAAATATCTCGTTGACACTTGGTTTATTTAGGAAGGGAGTTGAACAATTTCGACAAGCTTTGGAGATTTCATCACAATGTGTGCCAGCACAATATGGGCTTGCTTTGGGGCTTCTTTGTTTAGCAAAAGATTGCATGAACCTGGGAGCATTTAAGTGGGGCCCTTCTTTATTAGAGGTAGGAAAGGATGAATTCGGGTATATGTTATGTGATATTTTAAAGCAGAACTTTGTTGATACATCTGGCGTGCGGTTTGACTCTGAAGCTAGAACTGCATTAGCTTTTGTCACGCTTAGAGCTGACGGCGAGCGCGAGTTCTTGTTTTTCCGGAAATCTTTTAGAGGAGAAATTCTACAAAGCTAG 708 0.404 MLLVVEFSSAAADSIHSDEDQFDVIPPEIGFVSSLGKKKELKIEEIVTEMGGLLHAKASLDLNFVIVKNILAAKYKILLVSKTFSGFGPCLPVTGQSYGRAIKLDDKMVFALVESRNISLTLGLFRKGVEQFRQALEISSQCVPAQYGLALGLLCLAKDCMNLGAFKWGPSLLEVGKDEFGYMLCDILKQNFVDTSGVRFDSEARTALAFVTLRADGEREFLFFRKSFRGEILQS 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01373 235 Gene3D - 206 223 IPR023314 -
Aip08g01373 235 Gene3D - 175 226 IPR029056 -
Aip08g01373 235 Pfam pfkB family carbohydrate kinase 175 226 IPR011611 -
Aip08g01373 235 SUPERFAMILY Ribokinase-like 175 225 IPR029056 -
Aip08g01373 235 PANTHER PUTATIVE-RELATED 174 228 - -
Aip08g01373 235 PANTHER HEXOKINASE FAMILY MEMBER 174 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01373 Aip-Chr8 21890195 21891733 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01373 39 82 Core DNA Replication Machinery Family AT1G77320 61.364 5.76e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01373 K12600 - aip:110265262 255.758