Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01365 ATGAGCAGACCTTCAAGAAAGTTAGAGAAGTTAGGGTTCATCTTGAAGCTGTGCAAACTGTTGCGGGAGGTGGCTGCATGCCATCCCCAAAGAGGCGATTGGAATCTATGTCGGCGATTCAGCAAGGAAGAGCAGAAGAATAGTGGAACGGTAGGGTTCGCGCCATCGTTGCCTCTCCTCTGGAAGTCTGATAGTGAGTCAGATTTGGATGATGGCAGCACGTCAGAGTTGTCAGGTCATTGGACTGATGGTTGGAGCACCAATTCGGGAGATGGGGATGACTTGAACGGGTTGGAGGAACCGCTGACTAAGGAAGGGGATAGTGGCCATTCCGACAGTGAATACGACGGTAGGGATGGTGGTGGAAGCTATATGCATGCTGCTGCAGAGGATCCTGCAAACTCCGAGAATGTCATGGGTAAACAATTCAGTTGTCCAGACCCTGTGATTGCTTCCGTGTTGTTATCTGCAGAATTTAATGGGATTGGAGATGCGTATGCAAGCTATGTCGCGTATGCAAAGGGAATTAGCTTTGCAGTGCGAAAGGGAGATTCTATTAAAGACGAGGAGGGGAATATTGTTAGGAAGTTTTTCCTCTGCAATCGGCAAGGGCTGCGTGAAAAGAAGCATTACGAGCGAGTTGATAGAAAAAGGACTCATAAACCGGAGACGAGAACGAATTGCAATGCCAAGCTTGTGGTGTTTCTGGACAAAAGTTGTAGGAAATGGCGGACGAAAACATTGGTCGAGGAACATAATCACGAATTGGTGCCCCAGGAGTTCACTAATGTCATGGCTCCACATAGGAAGATCCTAGAAGGGGACAAAGCGCATATACATAGCATGCATGAAGCTGGGTTCAAAACAACTCAAATAATGGGCTTCTTTGCCCACATGTGTGGTGGATATCGGAATCTTAACTTCATTAGTAAGGACTTGTATAATTATATGGATGGAGTTAGGCAATCAAGGATTGTCGAGGGAGATACAGCCGCAGCAATAAGCTATTTGAAGGGCAAGGCTGAGTTGGATCCGATGGCAGTTGTACAGTACTCTTATTACGCTGAGAAGCACCTTGGGCACCTATTTTGGTCATATGGTAACATGCAGCATGACTATGAATGCTTTGGTGATGTGTTAGCATTTGACTCAACGTACAGAAAAAACTTATATAACAGACCTCTTGTGATCTTTTCTGGCACCAACCATCATAGACAGACAATTATTTTTGGGTTTGATTTGCTAGAGGACGAGAAGATTCCGTCCTACAAATGGTTGTTAAGTAGCTTCTTGGAGGTAATGAGGCACAAGGAGCCGAAAGTCGTTGTCACAGATGGCGATGAATCCATGCGAGAAGCCATTAGATGTGAATTCCCTAGTGCGACACATAGACTATGCACCTGGCATCTTGCTCAAAATGCAGTTGTTAATATTAAAGACAAAGATTTTTGTGCTGCGTTTAAGACTGCTGTGTATGGTCACTTTGATATGGAAGAATTTGACAGATATTGGGTAGACATGATCACGTCATTCGGTTTAGAGGACAACGATTAG 1554 0.4498 MSRPSRKLEKLGFILKLCKLLREVAACHPQRGDWNLCRRFSKEEQKNSGTVGFAPSLPLLWKSDSESDLDDGSTSELSGHWTDGWSTNSGDGDDLNGLEEPLTKEGDSGHSDSEYDGRDGGGSYMHAAAEDPANSENVMGKQFSCPDPVIASVLLSAEFNGIGDAYASYVAYAKGISFAVRKGDSIKDEEGNIVRKFFLCNRQGLREKKHYERVDRKRTHKPETRTNCNAKLVVFLDKSCRKWRTKTLVEEHNHELVPQEFTNVMAPHRKILEGDKAHIHSMHEAGFKTTQIMGFFAHMCGGYRNLNFISKDLYNYMDGVRQSRIVEGDTAAAISYLKGKAELDPMAVVQYSYYAEKHLGHLFWSYGNMQHDYECFGDVLAFDSTYRKNLYNRPLVIFSGTNHHRQTIIFGFDLLEDEKIPSYKWLLSSFLEVMRHKEPKVVVTDGDESMREAIRCEFPSATHRLCTWHLAQNAVVNIKDKDFCAAFKTAVYGHFDMEEFDRYWVDMITSFGLEDND 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01365 517 MobiDBLite consensus disorder prediction 72 93 - -
Aip08g01365 517 PANTHER OS02G0262500 PROTEIN 154 508 - -
Aip08g01365 517 Pfam MULE transposase domain 379 473 IPR018289 -
Aip08g01365 517 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 154 508 IPR031052 GO:0006355
Aip08g01365 517 MobiDBLite consensus disorder prediction 97 119 - -
Aip08g01365 517 MobiDBLite consensus disorder prediction 65 128 - -
Aip08g01365 517 Pfam FAR1 DNA-binding domain 169 258 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01365 Aip-Chr8 21679613 21682010 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip08g01365 MULE 1.5e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01365 - - aip:107610720 953.74