Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01364 ATGGCAGCACGTCAGAGTTGTCAGGTCATTGGACTGATGGTTGGAGCACCGATTCGGGAGATGGGGAATGACTTGAATGAGTTGGAGGAACCGCTGACTGAGGAAGGGGATAGTGGCCATTCCGACAGTGAATACGACGGCAGGGATGGTGGTGGAAGCTATATGCATGCTGCTGCAGAGGATCATGCAAACTCCGAGAATGTCATGGGTAAACAATTCAGCTGTCCAGATCCAGTGATTGCTTCCGTGTTGTTATCTGCAGAATTTAATGGGATTGGAGATGCGTATGCAAGCTATGTCGCTAATCAGCAAGGGCTGCGTGAAAAGAAGCATTACGAGCGAGTTGATAGAAAAAGGACTCATAAACCGGAGACGAGAACGAATTGCAATGCCAAGATTGTGGTGTTTCTGGACAAAAGTTGTAGGAAATGGGGGATGAAAACATTGGTCGAGGAACATAATCACGAATTGGCACCCCAAGAGTTCACTAATGTCATGGCTCCACATAGGAAGATCCCAGAAGGGCACAAAGTGCATATACATAGCATGCATGATGCTGGGTTCAAAACAACCCAAATAATGGGCTTCTTTGCCCACATGTGTGGTGGATATCGGAATCTTAACTTCATTAGTAAGGACTTGTATAATTATATGCATGGAGTTAGGCAATCAAGGATTGTCGAGGGAGATGCAGCCGCAGCAATAAACTACTTGAAGGGCAAGGCTGAGTTGGATCCGATGGCAGTTGTGCAGTATTCTTATTGCGCTGAGAAGCACCTTGGGCACTTATTTTGGTCAGATGGTAACATGCAGCATGACTATGAATGCTTTGGTGATGTGTTAGCATTTGACTCAACGTACAGAAAAAACTTATATAACAGACCTCTTGTGATCTTTTCTGGCACCAACCATCATAGACAGACAATTATTTTTGGGTTTGGTTTGCTAGAGGACGAGAAGATTCCGCCCTACAAATGGTTCTTAAGTAGCTTCTTGGAGGTAATGAGGCAAAAGGAGCAGAAATTCGTTGTCACAGATGGCGATGAATCCATGCGAGAGGCCATTAGATGTGAATTCCCTAGTGCAACACATAGACTATGCACCTGGCATCTTGCTCGAAATGCAGTTGTTAATATTAAAGACAAAGATTTTTGTGCTGCGTTTAAGACTACTGTGTATAGTCATTTTGATATGGAAGAGTTTGACAGATATTGGGTGGACATGATCACGTCATTCGGTTTAGAGGACAACGATTGGGTCGCAAAGACATACGAAAAGAGAGAGATGTGGGCAAATGCTTATTTGTGTGAGAAGTTTTGTGCCGGCATTGGAACCATTTCTCGGTGCGAGGGTATTAATTCATCACTTAAGAAATTTATCAAGTCTGGGAATTGCTTACTTGAGTTGGTCAAGAACCTGGATCGAGTAGTTAAAGATTACCGGAATAACGAGTTCATTGCAGATTACAAGACTCTTTACTCAAATCCGGTGTTGACAATGGGTCTTGAAGCATTGGAAAGATCTGTGAGCAAGTTCTACACGAGGGAAATATTCTATGAGGTGCAAAAACAGATTGAGGGAGTTGGGCCATTGTAG 1596 0.4361 MAARQSCQVIGLMVGAPIREMGNDLNELEEPLTEEGDSGHSDSEYDGRDGGGSYMHAAAEDHANSENVMGKQFSCPDPVIASVLLSAEFNGIGDAYASYVANQQGLREKKHYERVDRKRTHKPETRTNCNAKIVVFLDKSCRKWGMKTLVEEHNHELAPQEFTNVMAPHRKIPEGHKVHIHSMHDAGFKTTQIMGFFAHMCGGYRNLNFISKDLYNYMHGVRQSRIVEGDAAAAINYLKGKAELDPMAVVQYSYCAEKHLGHLFWSDGNMQHDYECFGDVLAFDSTYRKNLYNRPLVIFSGTNHHRQTIIFGFGLLEDEKIPPYKWFLSSFLEVMRQKEQKFVVTDGDESMREAIRCEFPSATHRLCTWHLARNAVVNIKDKDFCAAFKTTVYSHFDMEEFDRYWVDMITSFGLEDNDWVAKTYEKREMWANAYLCEKFCAGIGTISRCEGINSSLKKFIKSGNCLLELVKNLDRVVKDYRNNEFIADYKTLYSNPVLTMGLEALERSVSKFYTREIFYEVQKQIEGVGPL 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01364 531 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 119 523 IPR031052 GO:0006355
Aip08g01364 531 MobiDBLite consensus disorder prediction 31 55 - -
Aip08g01364 531 MobiDBLite consensus disorder prediction 33 49 - -
Aip08g01364 531 Pfam FAR1 DNA-binding domain 97 158 IPR004330 -
Aip08g01364 531 PANTHER OS02G0262500 PROTEIN 119 523 - -
Aip08g01364 531 Pfam MULE transposase domain 280 374 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01364 Aip-Chr8 21668638 21670320 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip08g01364 MULE 3.2e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01364 - - aip:107610718 808.52