Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01361 ATGGAGGCTGGTTCTGGATCTCTGACTCGCCTGGTGTCCCTTGTGTCTGCTGGGTTGCGTCGTTGCTCTTCGGAAACGGTGAAATTTGGCTCCTGTTCGTTCCTATTCTGTGCTCTTACATTGGGATGTCTGATAGTGAGTCGGATTTGGATGATGGCAGCACGTCAGAGTTGTCAGGTCATTGGACTAATGGTTGGAGCACCGATTCGGGAGATGGGGAATGACTTGAACGGGTTGGAGGAACCGCTGACTGAGGAAGGGGATAGTGGCCATTCCGACAGTGAATACGACGGCAGGGATGGTGGTGGAAGCTATATGCATGCTGCTGCAGAGGATCATGCAAACTCCGAGAATGTCATGGGTAAACAATTCAGTTGTCCAGACCCTGTGATTGCTTTCGTGTTGTTATCTGCAGAATTTAATGGGATTGAAGATGCGTATGCAAGCTATGTCGCGTATGCAAAGGGAATTGGCTTTGCAGTGCGAAAGGGAGATTCTATTAAAGACAAGGAGGGGAATATTGTTAGGAAGTTTTTCTACTGCAATCGGCAAGGGCTGCGTGAAAAGAAGCATTACGAGCGAGTTGATAGAAAAAGGACTCATAAACCGGAGACGAGAACGAATTGCAATGCCAAGCTTGTGATGTTTCTAGAAAAAAGTTGTAGGAAATGGCGGACGAAAACATTGGTCGAGGAACATAATCACGAATTGGCACCCCAAGAGTTCACTAATGTCATGGCTCCACATAGGAAGATCCCTGAAGGGCACAAAGCGCATATACATAGCATGCATGATGCTGGGTTCAAAACAACTCAAATAATGGGCTTCTTTGCCCACATGTGTGGTGGATATCGGAATCTTAACTTCATTATTAAGGACTTGTATAATTATATGGATGGAGTTAGGCAATCAAGGATTGTCGAGGGAGGTGCAGCCGCAGCAATAAGCTACTTGAAGGGCAAGGCTGAGTTGGATCCGATGGCAGTTGTGCAGTACTCTTATTGCGTTGAGAAGCACCTTGGGCACCTATTTTAG 1035 0.4667 MEAGSGSLTRLVSLVSAGLRRCSSETVKFGSCSFLFCALTLGCLIVSRIWMMAARQSCQVIGLMVGAPIREMGNDLNGLEEPLTEEGDSGHSDSEYDGRDGGGSYMHAAAEDHANSENVMGKQFSCPDPVIAFVLLSAEFNGIEDAYASYVAYAKGIGFAVRKGDSIKDKEGNIVRKFFYCNRQGLREKKHYERVDRKRTHKPETRTNCNAKLVMFLEKSCRKWRTKTLVEEHNHELAPQEFTNVMAPHRKIPEGHKAHIHSMHDAGFKTTQIMGFFAHMCGGYRNLNFIIKDLYNYMDGVRQSRIVEGGAAAAISYLKGKAELDPMAVVQYSYCVEKHLGHLF 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01361 344 MobiDBLite consensus disorder prediction 84 100 - -
Aip08g01361 344 Pfam FAR1 DNA-binding domain 150 238 IPR004330 -
Aip08g01361 344 MobiDBLite consensus disorder prediction 76 102 - -
Aip08g01361 344 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 136 261 - -
Aip08g01361 344 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 136 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01361 Aip-Chr8 21648827 21650524 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip08g01361 FAR1 1.8e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01361 - - aip:107610720 530.406