Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01357 ATGAAGACCCAAAGCTTCTTCATTCCACCGCCCATACTCCACCAACCACCGTTCCCTTGCTCTCGCCCTCTGTTTCCTCCTTCCTTCGCTGCGGCATTAGGGAACTCCGAGAAAGAATCGATACCGTTAAGAACAATCACAAGATCACCGAAGCATCACGTCCGCCAGGGTCCGACGGGACCAAGAAGCCGTCCTGAACGGCAGGCCCTATACCGAGACGCTCGTCGAAGTCTTTCACGACATCAACTGCCGTCTCGGAGCGACGACGTCCCCCTAACGAACGTCAGGACCGGGAACTCCGTCGCCCTCGTTGTCGTCACCGGCCGGCGGGGAACGCGTTTTTCAGCCGCAAGGGAAGTGTTAGGGTTGATAGTGAAAGGCGAGCTTCGCCATGTAAATGGGAACTGCATTGATGCCATTGATGATGAGTATTTTAAGCTGAGGAGGAAGGAAGGGAGGTTGGCAGTGGAGAGGGATGTTGCTGTGAGGGAATTCGCTGCGCCGCCGGTTATGGATGAGCTTGCTGCTAGGATGGCTGCAATGTCTAATGCACCCGATAATGCTGTCGAACTGAAGAAGAATCTTTCGGTTGCTTATAATCATAAACGGCAGGCAAAGATCAGAGGAGAGATATTGGAGATTGTGACTGTAGCTGAAGCACTAACACCAATTGATTGA 678 0.528 MKTQSFFIPPPILHQPPFPCSRPLFPPSFAAALGNSEKESIPLRTITRSPKHHVRQGPTGPRSRPERQALYRDARRSLSRHQLPSRSDDVPLTNVRTGNSVALVVVTGRRGTRFSAAREVLGLIVKGELRHVNGNCIDAIDDEYFKLRRKEGRLAVERDVAVREFAAPPVMDELAARMAAMSNAPDNAVELKKNLSVAYNHKRQAKIRGEILEIVTVAEALTPID 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01357 225 Gene3D ATP synthase, gamma subunit, helix hairpin domain 146 222 - -
Aip08g01357 225 PANTHER ATP SYNTHASE GAMMA CHAIN 172 225 IPR000131 GO:0015986|GO:0045261|GO:0046933
Aip08g01357 225 PANTHER ATP SYNTHASE GAMMA CHAIN 120 171 IPR000131 GO:0015986|GO:0045261|GO:0046933
Aip08g01357 225 PANTHER F0F1 ATP SYNTHASE SUBUNIT GAMMA 172 225 - -
Aip08g01357 225 PANTHER F0F1 ATP SYNTHASE SUBUNIT GAMMA 120 171 - -
Aip08g01357 225 MobiDBLite consensus disorder prediction 46 68 - -
Aip08g01357 225 MobiDBLite consensus disorder prediction 73 92 - -
Aip08g01357 225 SUPERFAMILY ATP synthase (F1-ATPase), gamma subunit 172 221 IPR035968 GO:0015986|GO:0045261|GO:0046933
Aip08g01357 225 Pfam ATP synthase 173 221 IPR000131 GO:0015986|GO:0045261|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01357 Aip-Chr8 21582920 21584004 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01357 120 221 Primary Pumps ATPases AT1G15700 47.015 2.11e-26 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01357 K02115 - qsu:112000322 114.775