Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01356 ATGGAGAGCACCGACTCATCCACCGGTTCGCAACAACCGAACCTTCCACCGGGGTTCCGGTTCCACCCCACCGACGAGGAGCTCGTTGTTCACTACCTCAAGAAGAAAGCTGCATCAGCTCCTCTCCCAGTCGCCATCATCGCCGAGGTTGATCTCTACAAGTTCGATCCATGGGAGCTACCAGCTAAGGCAACGTTTGGGGAGCAAGAGTGGTACTTCTTTAGCCCAAGGGACAGGAAGTATCCGAACGGTGCTCGGCCAAACAGGGCGGCAACTTCCGGGTACTGGAAGGCAACCGGGACGGATAAGCCGGTGCTGACCTCCGGTGGGACCCAGAAGGTGGGTGTGAAGAAGGCTTTGGTCTTCTATGGAGGGAAGCCACCGAGAGGGATAAAGACAAATTGGATCATGCATGAGTATAGACTTGCTGATAACAAACCTAACAATAGGCCTCCTGGTTGTGACTTGGGTAATAAGAAAAACTCTCTAAGGCTTGATGATTGGGTATTGTGCCGAATCTACAAGAAGAACAACACACATAGGTCTCCAATGGAACATGAGAGGGAAGATTCTATGGATGACATGATTGGAGGGATTCCTCCTTCCATCAACGTGGGGCAAATGAATGCAAGATTTCATCTCTCAAAAATGTCAACAAGCTTTAGCAACGGTTTGTTGGAAAACGACCATCACCATCACCAGAATCTTCTGGAAGGTATGATGCTAGGAGGAGGAAACAACAACAACAACAATGTTGTTCCTCCAAACATGTTGGGGTTGGGATCAGCCTCAAACACCATTAACAATAATAGTAATAAGGCAGAGCTTTCATTTGTACCAACCATGACTACATCTTCAAACACCAAGAGGACTCTATCATCTCTCTATTGGAATGAAGATGATGTTGCTGCTTCCAACAAAAGATTCAATTTGGAAAGTGGAGATCATAACCATGGAGAGAATAATGGGATGAATTGGTATGCTTAG 987 0.4711 MESTDSSTGSQQPNLPPGFRFHPTDEELVVHYLKKKAASAPLPVAIIAEVDLYKFDPWELPAKATFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTSGGTQKVGVKKALVFYGGKPPRGIKTNWIMHEYRLADNKPNNRPPGCDLGNKKNSLRLDDWVLCRIYKKNNTHRSPMEHEREDSMDDMIGGIPPSINVGQMNARFHLSKMSTSFSNGLLENDHHHHQNLLEGMMLGGGNNNNNNVVPPNMLGLGSASNTINNNSNKAELSFVPTMTTSSNTKRTLSSLYWNEDDVAASNKRFNLESGDHNHGENNGMNWYA 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01356 328 PANTHER NAC TRANSCRIPTION FACTOR 56 1 320 - -
Aip08g01356 328 SUPERFAMILY NAC domain 7 177 IPR036093 GO:0003677|GO:0006355
Aip08g01356 328 MobiDBLite consensus disorder prediction 1 20 - -
Aip08g01356 328 Gene3D NAC domain 24 181 IPR036093 GO:0003677|GO:0006355
Aip08g01356 328 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Aip08g01356 328 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 320 - -
Aip08g01356 328 ProSiteProfiles NAC domain profile. 15 176 IPR003441 GO:0003677|GO:0006355
Aip08g01356 328 MobiDBLite consensus disorder prediction 1 17 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01356 Aip-Chr8 21528046 21529632 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01356 1 310 NAC Transcription Factor Family AT3G15510 58.182 2.65e-120 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aip08g01356 NAM 9.1e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01356 - - vra:106763825 517.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01356 08 21528046 21529632 Aip08g01356 08 21528046 21529632 ECH