Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01334 ATGAACGAGAAGGCCAACGTAACCAAGGAGCTCAACGCCAAGCATAAGAAGATACTGGAAGGGCTTCTTAAATTACCAGAGAATAGGGAATGTGCCGACTGCAAAGCTAAGGGTCCAAGATGGGCTAGCGTAAATCTTGGCATCTTCATATGCATGCAGTGCTCAGGAATACATCGAAGTTTGGGAGTACATATATCAAAGGTTCGTTCTGCAACTCTAGACACATGGCTCCCCGAGCAAGTTGCATTCATTCAGTCCATGGGGAACGAGAGGGCAAATAGCTACTGGGAAGCAGAATTACCTCCAAACTATGATAGAGTTGGAATCGAGAATTTCATTCGTGCAAAGTATGAAGAGAAAAGATGGGTTGCAAGGGATGGGAAACCAAAATCACCTTCTAGACTGCGAGAAGAGAAAAGTTCTTCACATTGGCAGAGACCTGTGGAAAGAAGTGGGCATGGTTATGCAGCAGCTTCTGAGAATACCGTTGAGGAAAGGAAGAAAACCCAACCTTCAAATCCAAATCCGGCTGCAAGGATTAGTATTCTTACTCCTCCCAAAGCATCTGAACATGTTGCTCCTGTTAGCAAACCTCAGCATGTTGAGAAAGCAGAACCAGTAGCACCTCAACCACAAGTTGAAACTTCAAAGCAGGTTACAGACACAGCTCAAAATATTCCTGCAAAAGTTGATTATGCTACAGATCTTTTCAACCTGTTATCAATGGATGGCCCTAGTGAAAATGGCTCAGAGGCAACTGGTACTACTACTGAAGATAATAACTGGGCAGGTTTCCAATCTGCTCCAGTGGCTTCAACAACTGAGAAGGCTAGTCCTCCAAAAGCAGTTGAGAGTACTCCTCAATCTGCATCTGGAATTGAGGATCTATTTAAAGATTCACCTTCAGTGACACCAAGCTTAGCTGCAGAAAAACCCCAGAAAGATGTAAAAAATGATATCATGAGCCTCTTTGAGAAGAGCAATATGGTGTCTCCATTCTCTATGCATCAACAGCAGCTTGCCATGTTAGCGCAGCAACAGTCTCTTCTAATGGCTGCTGCAGCTAAATCAAATGTTGGGGATCCCAAGTACCCTGCTGGTATACAGCAACCTAGGCCCAATGTTCCTATCCAGAATTGGCCAGCTGCTGGTTACTCGATTCCTGGAGTCATGCCCATGGGTGGTCAAGGAGATCTGCAGACACTTATGCAGATAACGGCTCAGACTAGGGGCTTGACTCCACCACAATCAGCTGGGAGCTCTGTTCAGTATCCACCATCTAGTTTCTATGGCATGGGGCAAGTTGCTCCAGTTAATGGAACAACGACAATGGGAGTGGGTAAAACTCAATCAACAACTCCAGTGGCATCAACCACTTCACAATCTGCAAAGGATTATGATTTTTCGTCCTTAACTCAAGGGATGTTTGCAAAGCCTTGA 1440 0.45 MNEKANVTKELNAKHKKILEGLLKLPENRECADCKAKGPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLDTWLPEQVAFIQSMGNERANSYWEAELPPNYDRVGIENFIRAKYEEKRWVARDGKPKSPSRLREEKSSSHWQRPVERSGHGYAAASENTVEERKKTQPSNPNPAARISILTPPKASEHVAPVSKPQHVEKAEPVAPQPQVETSKQVTDTAQNIPAKVDYATDLFNLLSMDGPSENGSEATGTTTEDNNWAGFQSAPVASTTEKASPPKAVESTPQSASGIEDLFKDSPSVTPSLAAEKPQKDVKNDIMSLFEKSNMVSPFSMHQQQLAMLAQQQSLLMAAAAKSNVGDPKYPAGIQQPRPNVPIQNWPAAGYSIPGVMPMGGQGDLQTLMQITAQTRGLTPPQSAGSSVQYPPSSFYGMGQVAPVNGTTTMGVGKTQSTTPVASTTSQSAKDYDFSSLTQGMFAKP 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01334 479 Pfam Putative GTPase activating protein for Arf 17 125 IPR001164 GO:0005096
Aip08g01334 479 Gene3D Arf GTPase activating protein 1 130 IPR038508 -
Aip08g01334 479 CDD ArfGap 19 117 - -
Aip08g01334 479 PRINTS HIV Rev interacting protein signature 28 47 IPR001164 GO:0005096
Aip08g01334 479 PRINTS HIV Rev interacting protein signature 47 64 IPR001164 GO:0005096
Aip08g01334 479 PRINTS HIV Rev interacting protein signature 68 89 IPR001164 GO:0005096
Aip08g01334 479 ProSiteProfiles ARF GTPase-activating proteins domain profile. 16 130 IPR001164 GO:0005096
Aip08g01334 479 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 1 478 IPR044520 GO:0005096
Aip08g01334 479 SUPERFAMILY ArfGap/RecO-like zinc finger 15 124 IPR037278 -
Aip08g01334 479 PANTHER ARF GTPASE ACTIVATOR 1 478 - -
Aip08g01334 479 MobiDBLite consensus disorder prediction 442 479 - -
Aip08g01334 479 MobiDBLite consensus disorder prediction 125 224 - -
Aip08g01334 479 SMART arf_gap_3 16 130 IPR001164 GO:0005096
Aip08g01334 479 MobiDBLite consensus disorder prediction 442 469 - -
Aip08g01334 479 MobiDBLite consensus disorder prediction 241 295 - -
Aip08g01334 479 MobiDBLite consensus disorder prediction 241 314 - -
Aip08g01334 479 MobiDBLite consensus disorder prediction 125 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01334 Aip-Chr8 20892713 20899301 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01334 16 123 C2H2 Transcription Factor Family AT4G05330 49.138 4.50e-30 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01334 K12486 - gmx:100789910 739.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01334 08 20892713 20899301 Aip08g01334 08 20892713 20899301 ECH