Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01326 ATGACTCCTATGTTCAAGAAAGTTCTAAGTGCAACCGATACTAAAGTCAAGAGTGGACGTCTTGTGATTCCAACCAAAGGCGCAAGGGCTTATCTTCCAGAACTTGAGGATAAGCAACGATGCATTCTCCTTGAAATTCTTGACACCAAAGGGAATATTTGGAAGTTAAGCTACCGTTTTTGGGAGAACAACAGAGGGAGGATCTATGTTCTTGGAGGCCTTAAAGCTTATATTACTATTTGGAAATGGCAAGTTGGTGACCAAGTCACATTTTATCGAATTGAACCAGAAAATAAATATCTTATTGTAACTGAAAAAGAGCTTCCAGTATCTGAAAAGAAACTTCCAGCATCGTCGTCTTAA 363 0.3884 MTPMFKKVLSATDTKVKSGRLVIPTKGARAYLPELEDKQRCILLEILDTKGNIWKLSYRFWENNRGRIYVLGGLKAYITIWKWQVGDQVTFYRIEPENKYLIVTEKELPVSEKKLPASSS 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01326 120 SUPERFAMILY DNA-binding pseudobarrel domain 2 105 IPR015300 -
Aip08g01326 120 CDD B3_DNA 3 102 IPR003340 GO:0003677
Aip08g01326 120 Gene3D - 1 109 IPR015300 -
Aip08g01326 120 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 1 112 - -
Aip08g01326 120 Pfam B3 DNA binding domain 12 99 IPR003340 GO:0003677
Aip08g01326 120 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 1 112 - -
Aip08g01326 120 SMART B3_2 5 107 IPR003340 GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01326 1 102 B3 DNA Binding Superfamily AT4G21550 43.137 3.30e-23 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Aip08g01326 B3 8.2e-10 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01326 - - adu:110274859 246.128