Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01323 ATGATGACCCCAAGATCTCAGGCGAGGAGCTCGCTGGAGGAGATGCTTGAGTCTCTCCGGCGGAGGGATGAGGAGGAGAAGCCGAAGGACAAGCCGCCGGCATTGCCATCGCGGCCTCCCTCGAGGGCGAGGCTGCCATCGGTGAGAGTGCCTAATAGGTTCCTTTGCCATGGAGATGATGAGAAAGAGGATAGTGGTGTTCGTGGACGCCACAGGAGGAATGGTAGTTTTGGGGTCAAGAAGGTGAAGGTGGTTGTGGAATCACCTTACATTGTGAAATCAGAAGATAGCAACTTGAACTTGAGTGCTGAAGAATCACCACCACCAACAACAACATCGTCCCCTGTATCATCACAGGTTCAGGTTCCAAACTCTGCTGTTGCTGTTGAAACTGATACTCCTGCTGCTGCTGCTCCTGCTCCTTCTGATGCATCTGCTCCTAAACTTCAAGTTTGGTGTAGGCAACAAAAGGGGAACTGGGAACTAGGAAAGATACAGTCAACTTCAGAAGAGGAAGCATGCGTTTCGCTTTCAAATGGAAATGTTATGAAAGTGTCCAGATTAGCACTCCTACCGGCTAATCCCGACATTTTAGAGGGTGTGGATGATCTTATACAGCTTAGTTACTTAAATGAACCCTCAGTTCTTTACAATCTTAAGAGTCGTTACACTCAAGATTTGATTTACAGCAAGGCAGGGCCAGTTTTAATTGCACTCAATCCCTTCAAAGATGTCCAGATTTATGGAAGTGAATACGTAGAAGCTTATAAACAGAGATGTAATGATAATCCTCATGTTTATGCTGTGGCAGATGCAGCTTATAACGAGATGATAAGAGATGAAGTAAATCAATCCATTATCATAAGTGGTGAGAGTGGAGCAGGGAAGACAGAGACAGCGAAAATTGCTATGCAGTATTTAGCTGATCTAGGTGGTGGCAGTTGTGGGATAGAAAATGATGTTCTTCAGACAAATTTTGTACTAGAATCTTTTGGAAACGCAAAAACTTCTAGGAATGATAACTCTAGCAGATTTGGGAAGTTGATTGAAATTCATTTCAGCGCACTGGGGAAAATTTGTGGGGCTAAAATTCAAACATGTAAGAATTTTCAATCAAGAGTTGTTCAACTAGCCAATGGTGAGAGGTCATACCACATATTTTATCAGCTTTGTGCTGGTGCTTCACCTGATCTTAGAGATAGGCTGAAGCTTAGAATGGCCAGTGAATATAGATATCTTAATCAGAGTGACTGCATGATAATTGATGGTGTTAATGATGATAAAAAGTTTCAAGGGCTAGTGAAAGCGTTGGATGTTATTCGAATGTCCAAACAGGATCAAGAAAGGGTTTTCAAGTTGCTAGCTGCAATATTATGGCTGGGAAATATTACATTCCATGAAACTGACAATGAAAATCACATTGAGGTGGTTGATGATGACGCTGCAACCATTGCTGCCACACTGATGCAATGCAGTTTGAAGGAGCTAATGGTAACATTGTCTACCCATAAAATTAAAGCTGGCAAGGATACTATTACCAAAAAATTGACGTTGCGACAGGCCATTGATACAAGAGATGCATTAGCAAAATTTATGTATGCAAACTTGTTTGACTGGCTTGTAGAACAAGTCAACAAGGCGCTTGAAGTGGGTAAACGACGTACTGGGAGATCCATAAGTATCCTTGACATTTACGGTTTTGAGTCATTCCAGAAAAACAGCTTTGAACAGTTTTGTATAAATTATGCCAATGAAAGGCTTCAGCAACATTTCAATCGGCATCTGTTTAAACTTGAGCAGGAGGACTATGAATTAGATGGTGTAGATTGGACAAAAGTGGAATTTGAGGATAATCAAGTTTGTTTGGATCTCTTTGAGAAGAAGCCTCTGGGGCTGCTCTCTCTGTTGGATGAGGAATCAAATTTCCCAAGGGCCACTGATCTGACACTTGCTACTAAACTCAAGCAGCACCTGAGTTCCAATCCTTGTTTTAAAGGAGAAAGTGGCAAGGCTTTCAGCGTTCGGCATTATGCAGGGGAGGTCACATATGATACAAATGGGTTTCTGGAGAAGAACAGAGATCCACTGCCATCTGATTCCATTAAATTGTTGTCATCGTGCAGTTGCGAACTGCTGCAGTCATTCTCCCAAGTTCTTGACCCGTCTCAACAAACAAATTCCTCACACTTAGGTGCTATGGAGTCAAAAAGGCAGAGTGTTGGCACAAAGTTCAAGGGTCAGCTGTTTAAGTTGATGCATCAGATGGAGAGCACCACACCCCACTTTATTCGCTGTATAAAGCCCAATGCTAAGCAAGTTCCTGGCATATATGATGAAGACCTTGTCCTGCAACAGCTCAAATGTTGCGGAGTTTTGGAGGTTGTAAGGATTTCGAGGGCTGGATATCCTACTCGAATGACGCATCAAGAGTTTGCCAAACGGTATGGATTATTGCTTTCTGAGGCGCACACATCTTTAGATCCACTGAGTATCTCTATTGCTATTTTGCAACAATTTAATATCCCTCCAGAAATGTACCAAGTTGGCTACACCAAACTGTATCTTCGATCAGGACAGGTTGGTGTACTGGAGGATAGGAGAAAACATATTTTATGGGGAATACTTAGTGTTCAGAGAAGTTTTCGTGGTTATCAAGTCCGCAGTACTTTCCGTGAACTTAAGAATCGTGCAACAACTTTACAATCATTTATTCGTGGAGAAATTGCGAGAAAGAAATATGGTGTTATGATGGAGTCCTCTATAATCATTTCTTCTGAACATGATCAGCAGATTGAGGCAGCCATAGTAATACAATCTGTAATTCGTGGGTGGTTGGTTCGGAGGCATGCTAGTAGCCTTTATAGGCCGAAGAAACATCATGAAAATCCGAGACATAGACGAAGATCACGTCCAAAGTTTCCAGAAATACAGGATGTGTTGTCCAGAGAGCTGGCTCAGAACCTGCCTTCAGCTTTAGCAGAACTCCAAAAGCGGGTCGTCAAGGCTGAAGTAACTATAGAGCAAAGAGAAGTCGAAAATTCTCAATTGAGGGATCAACTAAAACAGTTTGAGAGAAGGTGGATCGAATACGAGAATAAGATGAAATCAATGGAGGAGATGTGGCAAAGACAAATGGTGTCTCTGCAAATGAGTCTTGCTGCTGCTAGAAAGAGCCTTGCCTCTGCCAGTGGTCAACATGCAAAACATGATGTCGTGGCGCAATTTGGCTCCGATTCTGAAGATACCGCTTCCATGGAATCTAGAACACCTCGAACACCTGGAGTGAGTACACCCTTGAAGTATTCTTGTAGTCTTTCTGAACTCGGAGCAGTAAGAGAAGTTAATGGTTGCGCAAATTCTGTGAGCAGTCTGACAAGGGAATTCGAGCAGCAGAGACACGTCTTTGATGAAGAGGCCAAAGCTATGCTCGAGGGTCAAAACGGTAACATGAAATGTTATGCTGAATATAAGAAACTTAAACGTAGGTTTGAGGGGTGGAAGAAAGAATACAAGATTAGATTGAAGGAGATAAAAGCAAAACTTCATAGGAATCCAGAAATGGATAGAGGGCGGCGAAAATGGTGGGGGAAATTGAGTTCAAAAGCACATAGTCTTGGTAGGGAATGA 3627 0.4262 MMTPRSQARSSLEEMLESLRRRDEEEKPKDKPPALPSRPPSRARLPSVRVPNRFLCHGDDEKEDSGVRGRHRRNGSFGVKKVKVVVESPYIVKSEDSNLNLSAEESPPPTTTSSPVSSQVQVPNSAVAVETDTPAAAAPAPSDASAPKLQVWCRQQKGNWELGKIQSTSEEEACVSLSNGNVMKVSRLALLPANPDILEGVDDLIQLSYLNEPSVLYNLKSRYTQDLIYSKAGPVLIALNPFKDVQIYGSEYVEAYKQRCNDNPHVYAVADAAYNEMIRDEVNQSIIISGESGAGKTETAKIAMQYLADLGGGSCGIENDVLQTNFVLESFGNAKTSRNDNSSRFGKLIEIHFSALGKICGAKIQTCKNFQSRVVQLANGERSYHIFYQLCAGASPDLRDRLKLRMASEYRYLNQSDCMIIDGVNDDKKFQGLVKALDVIRMSKQDQERVFKLLAAILWLGNITFHETDNENHIEVVDDDAATIAATLMQCSLKELMVTLSTHKIKAGKDTITKKLTLRQAIDTRDALAKFMYANLFDWLVEQVNKALEVGKRRTGRSISILDIYGFESFQKNSFEQFCINYANERLQQHFNRHLFKLEQEDYELDGVDWTKVEFEDNQVCLDLFEKKPLGLLSLLDEESNFPRATDLTLATKLKQHLSSNPCFKGESGKAFSVRHYAGEVTYDTNGFLEKNRDPLPSDSIKLLSSCSCELLQSFSQVLDPSQQTNSSHLGAMESKRQSVGTKFKGQLFKLMHQMESTTPHFIRCIKPNAKQVPGIYDEDLVLQQLKCCGVLEVVRISRAGYPTRMTHQEFAKRYGLLLSEAHTSLDPLSISIAILQQFNIPPEMYQVGYTKLYLRSGQVGVLEDRRKHILWGILSVQRSFRGYQVRSTFRELKNRATTLQSFIRGEIARKKYGVMMESSIIISSEHDQQIEAAIVIQSVIRGWLVRRHASSLYRPKKHHENPRHRRRSRPKFPEIQDVLSRELAQNLPSALAELQKRVVKAEVTIEQREVENSQLRDQLKQFERRWIEYENKMKSMEEMWQRQMVSLQMSLAAARKSLASASGQHAKHDVVAQFGSDSEDTASMESRTPRTPGVSTPLKYSCSLSELGAVREVNGCANSVSSLTREFEQQRHVFDEEAKAMLEGQNGNMKCYAEYKKLKRRFEGWKKEYKIRLKEIKAKLHRNPEMDRGRRKWWGKLSSKAHSLGRE 1208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01323 1208 Pfam IQ calmodulin-binding motif 896 913 IPR000048 GO:0005515
Aip08g01323 1208 Pfam IQ calmodulin-binding motif 932 949 IPR000048 GO:0005515
Aip08g01323 1208 Pfam Myosin head (motor domain) 201 856 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip08g01323 1208 MobiDBLite consensus disorder prediction 54 71 - -
Aip08g01323 1208 MobiDBLite consensus disorder prediction 1077 1098 - -
Aip08g01323 1208 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 174 950 IPR027417 -
Aip08g01323 1208 PANTHER MYOSIN-2 ISOFORM X1 78 1201 - -
Aip08g01323 1208 MobiDBLite consensus disorder prediction 97 124 - -
Aip08g01323 1208 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 146 195 IPR004009 GO:0003774|GO:0005524|GO:0016459
Aip08g01323 1208 ProSiteProfiles IQ motif profile. 930 959 IPR000048 GO:0005515
Aip08g01323 1208 Gene3D - 874 920 - -
Aip08g01323 1208 SMART iq_5 929 951 IPR000048 GO:0005515
Aip08g01323 1208 SMART iq_5 866 891 IPR000048 GO:0005515
Aip08g01323 1208 SMART iq_5 892 914 IPR000048 GO:0005515
Aip08g01323 1208 Gene3D - 382 438 - -
Aip08g01323 1208 Gene3D Myosin VI head, motor domain, U50 subdomain 439 547 - -
Aip08g01323 1208 Gene3D Kinesin motor domain 198 801 IPR036961 -
Aip08g01323 1208 CDD MYSc_Myo8 213 856 IPR036022 -
Aip08g01323 1208 Gene3D - 570 758 - -
Aip08g01323 1208 ProSiteProfiles Myosin motor domain profile. 199 868 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip08g01323 1208 ProSiteProfiles IQ motif profile. 873 899 IPR000048 GO:0005515
Aip08g01323 1208 PRINTS Myosin heavy chain signature 558 586 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip08g01323 1208 PRINTS Myosin heavy chain signature 326 353 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip08g01323 1208 PRINTS Myosin heavy chain signature 283 308 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip08g01323 1208 PRINTS Myosin heavy chain signature 229 248 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip08g01323 1208 PRINTS Myosin heavy chain signature 611 639 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip08g01323 1208 SMART MYSc_2a 193 869 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip08g01323 1208 Gene3D - 802 869 - -
Aip08g01323 1208 Coils Coil 992 1040 - -
Aip08g01323 1208 MobiDBLite consensus disorder prediction 1 73 - -
Aip08g01323 1208 MobiDBLite consensus disorder prediction 14 33 - -
Aip08g01323 1208 PANTHER MYOSIN 78 1201 - -
Aip08g01323 1208 ProSiteProfiles IQ motif profile. 893 920 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01323 Aip-Chr8 20669359 20677285 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01323 3 1197 Myosins gene family AT5G54280 58.401 0.0 1436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01323 K10357 - gmx:100819335 1660.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01323 08 20669359 20677285 Aip08g01323 08 20669359 20677285 ECH