Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01317 ATGGCCAATGAACTAACTCACAACTCACGTGCTTCACACATGCACGTTCACTACGACGACGACGACGACAGCGACGACTCAGGCGACCAAGAAGAAGGCGTGAACACTTCTGACGACAGCGACGATGACAACGACAACGAAGAAAGCCAGCTGGACGAGAAGGTGGGGGTGACAGGTGATGAGCGGCGGAGAGGGTGGGTGCTGGTGCTGGTGTCGGCGATGGGTCTGTTCGTGGACCCATTGGTGTTGTACGCGGTGTCAATAAGCGAGACATGCATGTGCGTGTTCGTTGATGGGTGGTTGGCGATAACGGTGACGGTGCTGCGGTGCATGACGGACACGTTGCACATCTGGAACATGTGGTTGCAGTTAAAGATGGCAAAAGCTTCGCTTCTTGGCACCACTTCTTCTTCTTCTTTAAATTCTCTTCGCTTCAGAAAGGCAAAGTGGGCTCTCTTCTTTAACCTCTTTCTCATTCTCCCTCTACCCCAGATGGTGCTATGGGAAGTAATCCCTTCTTTGTTGGAGGAAGGATCAATAACAGTGGCAATGACAGTGTTGTTAATGATGTTCCTATTTCAATACCTTCCCAAAATTTATCACTCGGTTTGCCTCTTGCGTCGCATGCAAACCCTCACTGGCTTCGTTTTTGGGACCGTTTGGTGGGGCATTGCCCTCAACTTGATCGCATATTTTGTCGCTTCTCATGCAGCAGGGGCATGTTGGTACTTGCTGGGGGTGCAGAGGGCAGCAAAGTGCCTAAAAGAGCAGTGTAGAAAGACAGCTGGTTGTGGAGTGAGAAGCTTATCTTGCAAGCAGCATATATATTATGGAAGCAATGGGATGGTGAAGGAGAAACCAAGGTTGGCTTGGGCAGCAAATAGGGAAGCAAGGTCAACATGCCTTGATGGCCCTGACAACTATGACTATGGTGCTTATCAATGGACTGTTCAACTTGTCACCAATGATAGCCGCTTGGAAAAGATCCTCTTCCCTATCTTCTGGGGCCTCATGACTCTCAGCACATTTGGGAGCCTAGAGAGCACAACAGAATGGCTTGAAGTTGTTTTCAACATTATTGTATTAACTAGTGGCCTTCTTCTCGTCACTATGTTGATTGGAAACATTAAGGTGTTTTTGCATGCTACAACATCAAAGAAGCAAGCAATGCAACTGAAGATGAGGAATATTGAGTGGTGGATGAGCAAGAGGCGGCTGCCACAAGGGTTTAGGCAGCGTGTGCGCAACTACGAGAGGCAGCGCTGGGCTGCTACGCGTGGAGTTGACGAATGCCAGATGATCAAAAACCTCCCTGAGGGGCTGAGGAGGGACATTAAGTACCATCTCTGTTTGGATTTGGTTAGACAGGTACCACTATTTCAGCATATGGATGATCTGGTCTTAGAGAACATTTGTGACCGTGTGAAGTCCCTTGTATTCACAAAGGGAGAAACGATCACTAGAGAGGGAGATCCAGTTCAAAGAATGCTATTTGTCGTAAGGGGCCACCTTCAAAGTAGCCAAGTCCTAAGAGATGGGGTGAAGAGTTGTTGCATGCTAGGGCCAGGGAACTTCAGCGGCGACGAACTCCTCTCTTGGTGTCTAAGGAGGCCGTTCATCGAGCGCCTGCCGCCGTCCTCATCCACATTGGTCACGCTAGAAACCACCGAGGCATTCGGCCTTGAAGCCGAGGATGTAAAGTATGTGACACAACATTTTAGGTATACTTTTGTGAAGGAAAAAGTGAAAAGGAGCGCGAGGTATTACTCGCCAGGGTGGAGAACTTGGGCTGCCGTGGCTATTCAATTGGCTTGGAAAAGGTACCGGCATCGGTTGACTTTGACTTCTTTGTCCTTTATTAGGCCTAGAAGGCCTGTGTCAAGGTGCTCTTCCTTGGAAGAGGATAGGCTTCGGCTCTATACGGCCATGTTAACTTCACCAAAGCCTAATCAAGAGGATTTTGACGTTTCATAA 1974 0.4883 MANELTHNSRASHMHVHYDDDDDSDDSGDQEEGVNTSDDSDDDNDNEESQLDEKVGVTGDERRRGWVLVLVSAMGLFVDPLVLYAVSISETCMCVFVDGWLAITVTVLRCMTDTLHIWNMWLQLKMAKASLLGTTSSSSLNSLRFRKAKWALFFNLFLILPLPQMVLWEVIPSLLEEGSITVAMTVLLMMFLFQYLPKIYHSVCLLRRMQTLTGFVFGTVWWGIALNLIAYFVASHAAGACWYLLGVQRAAKCLKEQCRKTAGCGVRSLSCKQHIYYGSNGMVKEKPRLAWAANREARSTCLDGPDNYDYGAYQWTVQLVTNDSRLEKILFPIFWGLMTLSTFGSLESTTEWLEVVFNIIVLTSGLLLVTMLIGNIKVFLHATTSKKQAMQLKMRNIEWWMSKRRLPQGFRQRVRNYERQRWAATRGVDECQMIKNLPEGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLVFTKGETITREGDPVQRMLFVVRGHLQSSQVLRDGVKSCCMLGPGNFSGDELLSWCLRRPFIERLPPSSSTLVTLETTEAFGLEAEDVKYVTQHFRYTFVKEKVKRSARYYSPGWRTWAAVAIQLAWKRYRHRLTLTSLSFIRPRRPVSRCSSLEEDRLRLYTAMLTSPKPNQEDFDVS 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01317 657 CDD CAP_ED 459 565 IPR000595 -
Aip08g01317 657 MobiDBLite consensus disorder prediction 22 49 - -
Aip08g01317 657 Pfam Cyclic nucleotide-binding domain 479 567 IPR000595 -
Aip08g01317 657 SUPERFAMILY Voltage-gated potassium channels 67 380 - -
Aip08g01317 657 SMART cnmp_10 459 588 IPR000595 -
Aip08g01317 657 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL-LIKE PROTEIN 15 653 - -
Aip08g01317 657 Gene3D Helix hairpin bin 384 450 - -
Aip08g01317 657 MobiDBLite consensus disorder prediction 1 56 - -
Aip08g01317 657 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 15 653 - -
Aip08g01317 657 ProSiteProfiles cAMP/cGMP binding motif profile. 459 569 IPR000595 -
Aip08g01317 657 Gene3D Jelly Rolls 457 575 IPR014710 -
Aip08g01317 657 SUPERFAMILY cAMP-binding domain-like 385 573 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01317 Aip-Chr8 20506018 20512370 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01317 67 655 Ion Channels AT5G54250 77.870 0.0 965
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01317 K05391 - zju:107430493 1038.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01317 08 20506018 20512370 Aip08g01317 08 20506018 20512370 ECH