Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01315 ATGGATTCGAACTTCCAGTTCACGGGGGTAGAGGATGATTCAGATTGGCTTAGTGAAGAAGAGTATTTTCGTGTGTCTTGTTCGAGTGGGGATGACGAGAACGACTCGTTCGGGAATGGGTCTGAGACTGTTGAAATGGGTGATGATGCCCACGAGAACGGCGTCGGCTCAGACCCAGAGACTTGTCAGGGTGATGCTCCCAGTTTTAGGTCCACAGAGAATTTTGTCGACAAAGTATTTAGTACCGAGGAAGAGGCTTATGCGGCATACAAACAATTTGCCCGACTACGGGGGTTCGGTGTAAGGAAGGAGCGAGTACGGGAGGAGAAGTTGGAGAGTCGGACGGGTTGTTTTGCAAAGATGAAAATTTACTATGACATGCAAGACCAGGTTTGGAAAGTCCAGAGGATAGACAACAATCACAACCACCCTCTGGCTACAACCATGTTTAGTCATCTTCTTCCTAGTCATCAGAATTTGAGTGAGTCTGATAAGGCTAAAGTTGATAGTCTAAAAAAGTTTGGGATTGCCACATCGAAGATTATGACTTACATGGCCAGGCAGTCAGGGGGCTATGGGATGCTTCGGTTTACGAAGAGGGATCTGTATAATTATGTTGACAGCCAAAGAATAGCACAAATTAATGACAGAGATGCAGCAGCAACGATAAGTTATTTGGAAGGCAAGGCCAATGCTGACATGATGACGGTCGCCAGATATACCAAAACAGTAGAGGACCGGCTTGGTAGCCTATTCTGGGTGGACAGGCAGATGATGGAGGATTATCAGTTGTTCGGTGACGTGGTTGCATTTGATGCAACATACCGGTCCAATAAGTACAAGAAGCCTCTAGTTGTGTTCTCTGGATCAAATCACCACAAGCAGATGGCGATTTTTGGTTTTGCATTGCTGGAGGACGAGGATGTCCGTACATATAGGTGGGTGTTGTTGAATATTCTTGATGTCATGGATAACAAGAAGCCTTCCATTGTGGTCACTGACGGGGATAAAGCCATGCGGGCAGCAATTACGAATGTGCTTCCTTTAGCCAGGAAGGTGTTCAAGAAGGCAGTTTACGCAAACTTCGATATTGCGGAGTTTGAGGAGTATTGGAGGACGGCCGTGGAGAATCTAGGATTAATGAACAACAGCTGGGTCAAAAGCACCTATGAACTAAGACATAGTTGGGCAACGGCATATCTACGGGGTACTTTTTGCGCCAGCTACAGGACAACTTATAGGTGTGAGGGCATAAATGCATTCGTCAAAGGGTTCCTTAAGTCGACAAATAGCCTTCTGGAATTGGTTCACAGCTTGGATAGGGTGGTGAAAGATTACTGCAACAATGAGGTCACAGCGCAATGTTATTCGTCGTACTACACGCCCGTTCTGACGACAGGTCTTGATAACAGAGCTGTTTCCTTCGAATATATACACCAGGGAAGTCTTCAAGGAGGTTAG 1461 0.4613 MDSNFQFTGVEDDSDWLSEEEYFRVSCSSGDDENDSFGNGSETVEMGDDAHENGVGSDPETCQGDAPSFRSTENFVDKVFSTEEEAYAAYKQFARLRGFGVRKERVREEKLESRTGCFAKMKIYYDMQDQVWKVQRIDNNHNHPLATTMFSHLLPSHQNLSESDKAKVDSLKKFGIATSKIMTYMARQSGGYGMLRFTKRDLYNYVDSQRIAQINDRDAAATISYLEGKANADMMTVARYTKTVEDRLGSLFWVDRQMMEDYQLFGDVVAFDATYRSNKYKKPLVVFSGSNHHKQMAIFGFALLEDEDVRTYRWVLLNILDVMDNKKPSIVVTDGDKAMRAAITNVLPLARKVFKKAVYANFDIAEFEEYWRTAVENLGLMNNSWVKSTYELRHSWATAYLRGTFCASYRTTYRCEGINAFVKGFLKSTNSLLELVHSLDRVVKDYCNNEVTAQCYSSYYTPVLTTGLDNRAVSFEYIHQGSLQGG 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01315 486 MobiDBLite consensus disorder prediction 27 69 - -
Aip08g01315 486 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 113 348 IPR031052 GO:0006355
Aip08g01315 486 Pfam FAR1 DNA-binding domain 71 146 IPR004330 -
Aip08g01315 486 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 352 456 IPR031052 GO:0006355
Aip08g01315 486 PANTHER OS02G0262500 PROTEIN 113 348 - -
Aip08g01315 486 PANTHER OS02G0262500 PROTEIN 352 456 - -
Aip08g01315 486 Pfam MULE transposase domain 268 351 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01315 Aip-Chr8 20442009 20443626 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip08g01315 MULE 4.2e-21 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01315 - - ahf:112709419 726.857