Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01295 ATGGAAGAGGGGAATGAGTGTTTGTGCGCGCTGTGTGGGAAGAGCGCTCAGATGCTGTGCGAGTCAGACCAGGCTAAGCTATGCTGGGACTGCGATCGCACCGTTCACGGCGCCAACTTCCTTGTCGCCAAGCACGTCAGAGTGCTCCTCTGCCGCCACTGCCACCGCCCTACTCCCTGGAAGGCTTCTGGTCCCTCCCTCACCGTAACCTCCTCTCTCTGCCACCCTTGCTCTTCTTCTTCTTCTCTTCCCATCACCACCGCCATTCATGATCATGAATCTGAAGACGATGAATCTGAGGATGATGAAGACGAGGAAGAGGAAGAGGAAGAGGAAGATGAATATGAAGCAGAGGAGGAGGAGGGGGAGAATCAGGTGGTGCCTTTGTCTTCCGCTTCCGGCGGCGGTGGTGGTAATACTAATGGCTACGATGACGGAGACATGTCTAGCAACACTGCTTCTTCTTTTCGATTCAACAACTTGAAGCGCTTTCAACATAATAATCATCACAACATCCACCATTCTTCTATTTCTGATGAAGATGACGACGATGTAGGTTGTTGCTCGTCTGAAAGATTAGGAGGAGATAACGATGATGAAGATTATATGAGGCCATTCAAGCACCGTAGAATCTTCAATCACAGGGATGATATACATTGCCACAATCATAGACGGTGA 678 0.5 MEEGNECLCALCGKSAQMLCESDQAKLCWDCDRTVHGANFLVAKHVRVLLCRHCHRPTPWKASGPSLTVTSSLCHPCSSSSSLPITTAIHDHESEDDESEDDEDEEEEEEEEDEYEAEEEEGENQVVPLSSASGGGGGNTNGYDDGDMSSNTASSFRFNNLKRFQHNNHHNIHHSSISDEDDDDVGCCSSERLGGDNDDEDYMRPFKHRRIFNHRDDIHCHNHRR 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01295 225 MobiDBLite consensus disorder prediction 172 200 - -
Aip08g01295 225 Coils Coil 89 125 - -
Aip08g01295 225 CDD Bbox1_BBX-like 8 50 - -
Aip08g01295 225 Pfam B-box zinc finger 8 47 IPR000315 GO:0008270
Aip08g01295 225 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 9 194 - -
Aip08g01295 225 SMART bboxneu5 4 50 IPR000315 GO:0008270
Aip08g01295 225 PANTHER OS08G0178800 PROTEIN 9 194 - -
Aip08g01295 225 MobiDBLite consensus disorder prediction 91 151 - -
Aip08g01295 225 MobiDBLite consensus disorder prediction 126 151 - -
Aip08g01295 225 MobiDBLite consensus disorder prediction 94 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01295 Aip-Chr8 19895416 19896812 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01295 9 77 C2C2-CO-like Transcription Factor Family AT5G54470 65.217 1.98e-25 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01295 - - aip:107614151 358.221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01295 08 19895416 19896812 Aip08g01295 08 19895416 19896812 ECH