Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01294 ATGGGATTGAATGATTCAATGAAATTTATTGGTGGATTCTTTGATTTTGATGGACAGGAGGGGGCAGAGGAGGATGTTGATAATAACAAAAATGAAGACATAATTGGAGAGCCTCTTGAGATCGATGACAAGGAAGATGAACAACCGGTGGAGTGGCCTCGAAAGACTTCGAAGTACATGACCAAGTACGAGCGTGCCCAGATTTTGGGTACCCGTGCTCTCCAAATCAGTATGAATGCTCCTGTTATGGTGGAACTGGAGGGAGAAACTGATCCACTTAAGGACATATGTAAGGATGGTGGTATATTTAAGAAAATACTTAAGGAGGGGAAAGGATGGGAAAACCCCAAGGATCCTGATGAAGTATTAGTTAAGTATGAGGTTCTTCTGGAAGATGGAAAGGCTGTGGCTAAGTCTGATGGAGTACCCGGCCCCAACCCGGTCCCCAACCCAATTGAAGAGATTTCAACCCGGTCCCCAACCCTAATCGAGCTACCCTTTTCGCGATCGAACTCACTCTTTCACCCTAGTCACTCTTTCACCCTGGCTACCCCTGGAGGAGCTCACATCCCTGCCGTCACCAGAACCACCCTCGCTGCGCCGTTAGCCTCCGCTCCCCCTCCGCCTCGTCTCCTCATCGCCGTTACCAGCATCCTTAGCGTCAGCGTCAGCGCCACCTCTTTCAACCGATTCCTTCCAAAAGCGAATACGACAAGGGACAATGTGGGAAGATGTCGGAGCTTGGAGGCAGCAACTGTTTTCCGTGTCTCTTGCTCGGTGTCAATGTCAGTCTTGCCCTTGTTGAAGGAATTGTTGCTTTCTTTGCGTTGTTTCAGGTTCTTCTCCTCTTTCTTTCATGTTTCAATTCGCGCCAGCATTGCTTTTCGGATATGA 894 0.4866 MGLNDSMKFIGGFFDFDGQEGAEEDVDNNKNEDIIGEPLEIDDKEDEQPVEWPRKTSKYMTKYERAQILGTRALQISMNAPVMVELEGETDPLKDICKDGGIFKKILKEGKGWENPKDPDEVLVKYEVLLEDGKAVAKSDGVPGPNPVPNPIEEISTRSPTLIELPFSRSNSLFHPSHSFTLATPGGAHIPAVTRTTLAAPLASAPPPPRLLIAVTSILSVSVSATSFNRFLPKANTTRDNVGRCRSLEAATVFRVSCSVSMSVLPLLKELLLSLRCFRFFSSFFHVSIRASIAFRI 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01294 297 Gene3D - 96 165 IPR046357 GO:0003755
Aip08g01294 297 PANTHER DNA-DIRECTED RNA POLYMERASES II AND V SUBUNIT 6B 19 98 - -
Aip08g01294 297 SUPERFAMILY RPB6/omega subunit-like 26 95 IPR036161 GO:0003677|GO:0003899|GO:0006351
Aip08g01294 297 MobiDBLite consensus disorder prediction 23 37 - -
Aip08g01294 297 SUPERFAMILY FKBP-like 95 138 - -
Aip08g01294 297 PANTHER DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2 19 98 - -
Aip08g01294 297 MobiDBLite consensus disorder prediction 18 48 - -
Aip08g01294 297 Gene3D - 12 95 IPR036161 GO:0003677|GO:0003899|GO:0006351
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01294 Aip-Chr8 19868370 19873354 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01294 91 142 Calmodulin-binding Proteins AT3G25230 73.077 9.51e-18 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01294 K03014 - aip:107634460 206.838