Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01292 ATGGACCGTGGCCATGTTTCAGATATCAGTATGACAGAAGTTAACAAAGAACTTGTGGCATTAATTAAGGAAAAACTCGAAGCGATTTCATCTTTGAAATCCATCTTCAGGGTCCCTGTGAAGCTTCTACAAGCAAACCAGAAGGTATACGTCCTTACTAAAGTGTCAAAAGTCAACTTCACCGGTTCGATGGAGGTAGGCCGTGAAATAATGCATGCTGCAGCTAGCAGCAACTTGAAACAAGTTTCACTTGAATTAGTAGAAAAGTCACCTCTTCTAATTTTTTATGATGCTGATGTAGATAAAGCTGATAGCCTTGCTCTCTTGGGCATAGTATATAACAAGGGTGAGATATGTGTTGCAAGTTCACGTGTGTTTGTTCAGGAAGGGAATGTGCTGAATAATTATATTAAAAGATGGATTTAG 426 0.3897 MDRGHVSDISMTEVNKELVALIKEKLEAISSLKSIFRVPVKLLQANQKVYVLTKVSKVNFTGSMEVGREIMHAAASSNLKQVSLELVEKSPLLIFYDADVDKADSLALLGIVYNKGEICVASSRVFVQEGNVLNNYIKRWI 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01292 141 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 88 130 IPR016163 GO:0016620
Aip08g01292 141 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 53 87 IPR016162 GO:0016491
Aip08g01292 141 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 53 138 - -
Aip08g01292 141 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 112 123 IPR016160 GO:0016491
Aip08g01292 141 SUPERFAMILY ALDH-like 54 130 IPR016161 GO:0016491
Aip08g01292 141 PANTHER DEHYDROGENASE, PUTATIVE-RELATED 53 138 - -
Aip08g01292 141 Pfam Aldehyde dehydrogenase family 53 130 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01292 Aip-Chr8 19698651 19699481 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01292 55 130 Aldehyde Dehydrogenase Gene Family AT3G24503 78.947 2.00e-33 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01292 K12355 - aip:110265414 154.066