Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01283 ATGAGAAGCCTTGTGTCACTTTTTGTGACTTCTCTTTTCGCTTCATTCTTATCAAGCTTCTCAGCTCTAGACATTCTTACTACACATAAACTCATCAAAGATGGTGACAAGTTAGTTTCCGCAAGAGGGACCTTTGAACTGGGATTCTTCAGCCCTGGTAACTCCAGAAACCGATATTTGGGAATATGGTACGTGGCTTCACCTAGAACTCCTATATGGGTAGCAAATAGAGAAGCTCCTATTAGAGATGGTTCAGGAATTCTCAGGATCACTGAGGGGGGTATCCTTAACCTTATTAATATCACAGGTAATATTGTTTGGTCTTCAAATGCATATGCAACTGCAGAAGATGCATTTGCACAGCTTCTGGAATCAGGGAATCTTGTGGTGAGAGCCTCTAATGGTAGAACCACAGAATCCTATTTGTGGCAGAGTTTTGATTATCCTTCTGACACATATATGCCTGGAATGAAGATTGGGAAGAACCTAGTTACTGGTTTGGAGACATTCTTAACATCTTGGAAGAGTAAAGATGACCCTGCCCCTGGTAAGTACTCAATTCATCTTGACACTCATGGTTGGCCACAGGTGGTTATCAGAAAAGGAACCACTATAGTGTCACGATTTGGATCGTGGAATGGTCTTGAGTTGACAGGAAATCCAGCAAGGTCAGAAGCATCATTGGTCTTTCAATTCACATATAGTGAAAGTGAAGTTTATGTGGGTTACCAACTCAGGAAGAGTTCTGAGTTGTCTATGTTGTCAAGAGATGTACTGCATCCATCAGGCAACATGCAGCGATTCGTATGGATCAATCGGATCCAGAATTGGGCACTCTCCTCAACGTCTCTGTCAAATCAGTGCCAACATTATGCATGGTGTGGTGCTAATGCCGTCTGCAATAGCAATAACTTCCCTGTTTGTGGATGCTTGACCGGGTTCAGTCCTAAGTCTCCAAAAGATTGGAATAATGGGAACTGGTTTACTGGATGTGAACGCAGGACGAACTTGAATTGCCATGATGATGGCTTCTTGAGGTACACAGGAGTTAAATTGCCTAATACGTCCTCATCATTTTTCAGTGAAACCTTGAATCTTAAAGAATGTGCTCAATTGTGCTTAAGTAAATGTTCCTGTACTGCATATGCAAACTTATATGTTGATGGAAGTGGTTGCTTGCTTTGGTTTGTCGAACTGGTGGATATAATCCAATATAGCCAGCGCGGTCAAGACCTTTATGTAAGGCTAGCTGCTTCAGACATTGATAGTGTAAAGAAAATGGAGCGATCCAACAAAGACAAAAGACTAGTGGGTATCATAATTGTATGTGGTGTTTTGGTCATGATTATCTTCCTCTTTCTGGGACACTTAACCTATAAACAAAGTGACAGCAGAAGAAAGAGAGAGAAAATTCACAACCAGGATTACAGATGTGGACAAAGAAAGGAAGAGGTGGACTGGCCAACATTTGATTTTCAAACTATAGCTAATGCAACAGCCAACTTTTCTAGTGATAACAAGGTGGGAGAAGGTGGATTTGGCCCTGTTTACAAGGGCACATTAATTGATGGACAAGAGATAGCTGTGAAGAGGCTCTCCATAAATTCTGGCCAAGGACTAAATGAATTGAGAAATGAAGTCAATACAATTGCTAAGCTTCAGCACCGTAATCTTGTTAAGCTTTTTGGTTGTTGTCTTGAGGAGGAAGAGAAAATGTTAGTATATGAATATGTGCCTAACAAAAGCTTGGACTCCTTTATATTTGACCAAACAAGGAGAAAATTACTAGATTGGCCAACACGCATGCATATTATTGTTGGCATTGCTCGTGGGCTTCTTTATCTTCATCAAGACTCTAGAATGAGGATTATTCACAGGGACCTCAAAGCTAGCAATATTCTTCTAGATGCCAATATGAATCCAAAAATCTCTGACTTTGGGCTTGCGAAGGCCATTGGGGGAGATCAAACTGAGGCGAAAACTCATCGGATAGTTGGGACATATGGTTATATGCCTCCTGAGTATGCAGTTCATGGGAAATTTTCTGTGAAGTCAGATGTCTTTAGCTTTGGAGTTTTGGCACTGGAGATACTAAGCGGCAAGAAGAATAGAGATTTCAGCGACCCGAATCATAGCCTTAATCTTCTTGGACATAGCTGGAGATTGTGGGTTGAGCAGAGACACTTACAACTGATTGATGATTCATTAAGCAACGCTTCTGATGCAACTGAAATACTTAGATGCATACATATTGCTCTATTATGTGTGCAACAAAGTCCGGAAGACAGGCCAGACATGCTTTCTGTGGTTGTAATGTTAACTAGTGATAGCAATCTCCCTAAGCCAAAACAGCCTGCATTTTATGTGGAAAGGAATTGTCACAATAAAGGCTTTCTAGCAAGTAATCAGAACACATGTTCTGAAAATGAAGTTACAATCTCAGTGGTAGAGGCAAGGTAG 2460 0.4102 MRSLVSLFVTSLFASFLSSFSALDILTTHKLIKDGDKLVSARGTFELGFFSPGNSRNRYLGIWYVASPRTPIWVANREAPIRDGSGILRITEGGILNLINITGNIVWSSNAYATAEDAFAQLLESGNLVVRASNGRTTESYLWQSFDYPSDTYMPGMKIGKNLVTGLETFLTSWKSKDDPAPGKYSIHLDTHGWPQVVIRKGTTIVSRFGSWNGLELTGNPARSEASLVFQFTYSESEVYVGYQLRKSSELSMLSRDVLHPSGNMQRFVWINRIQNWALSSTSLSNQCQHYAWCGANAVCNSNNFPVCGCLTGFSPKSPKDWNNGNWFTGCERRTNLNCHDDGFLRYTGVKLPNTSSSFFSETLNLKECAQLCLSKCSCTAYANLYVDGSGCLLWFVELVDIIQYSQRGQDLYVRLAASDIDSVKKMERSNKDKRLVGIIIVCGVLVMIIFLFLGHLTYKQSDSRRKREKIHNQDYRCGQRKEEVDWPTFDFQTIANATANFSSDNKVGEGGFGPVYKGTLIDGQEIAVKRLSINSGQGLNELRNEVNTIAKLQHRNLVKLFGCCLEEEEKMLVYEYVPNKSLDSFIFDQTRRKLLDWPTRMHIIVGIARGLLYLHQDSRMRIIHRDLKASNILLDANMNPKISDFGLAKAIGGDQTEAKTHRIVGTYGYMPPEYAVHGKFSVKSDVFSFGVLALEILSGKKNRDFSDPNHSLNLLGHSWRLWVEQRHLQLIDDSLSNASDATEILRCIHIALLCVQQSPEDRPDMLSVVVMLTSDSNLPKPKQPAFYVERNCHNKGFLASNQNTCSENEVTISVVEAR 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01283 819 SMART blect_4 29 149 IPR001480 -
Aip08g01283 819 ProSiteProfiles Bulb-type lectin domain profile. 23 143 IPR001480 -
Aip08g01283 819 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Aip08g01283 819 PANTHER - 9 817 - -
Aip08g01283 819 ProSiteProfiles PAN/Apple domain profile. 339 417 IPR003609 -
Aip08g01283 819 CDD PAN_AP_plant 335 417 - -
Aip08g01283 819 Pfam Protein tyrosine and serine/threonine kinase 505 771 IPR001245 GO:0004672|GO:0006468
Aip08g01283 819 SMART serkin_6 502 753 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01283 819 SUPERFAMILY Protein kinase-like (PK-like) 486 773 IPR011009 -
Aip08g01283 819 SUPERFAMILY alpha-D-mannose-specific plant lectins 71 180 IPR036426 -
Aip08g01283 819 Gene3D Transferase(Phosphotransferase) domain 1 578 786 - -
Aip08g01283 819 Pfam D-mannose binding lectin 70 175 IPR001480 -
Aip08g01283 819 ProSiteProfiles Protein kinase domain profile. 502 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01283 819 CDD STKc_IRAK 508 774 - -
Aip08g01283 819 Gene3D - 19 146 IPR036426 -
Aip08g01283 819 Pfam S-locus glycoprotein domain 208 318 IPR000858 GO:0048544
Aip08g01283 819 SMART ntp_6 339 416 IPR003609 -
Aip08g01283 819 Gene3D Phosphorylase Kinase; domain 1 460 577 - -
Aip08g01283 819 PANTHER - 9 817 - -
Aip08g01283 819 CDD B_lectin 31 149 IPR001480 -
Aip08g01283 819 Pfam PAN-like domain 339 402 IPR003609 -
Aip08g01283 819 PIRSF SRK 1 819 IPR024171 GO:0004674
Aip08g01283 819 Pfam Domain of unknown function (DUF3403) 774 819 IPR021820 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01283 Aip-Chr8 19414765 19418235 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01283 432 787 Receptor kinase-like Gene Family AT4G05200 52.941 1.12e-123 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip08g01283 PK_Tyr_Ser-Thr 1.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01283 - - adu:107462504 1610.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01283 08 19414765 19418235 Aip08g01283 08 19414765 19418235 ECH