Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01282 AATCTCTTATGGCAAAGTTTTGATTATCCTTGTGATACTTTGTTGCCAGGAATGAAACTTGGATGGAATCTAGAGACAGGACTAAATAGGTTCCTAACTTGTTGGAAAAGTACAGACGATCCTGATTCCGGAGACTACTCGTTTAAAATAGATCTTAGAGGTTATCCACAAGCAGTTCAATTGAAGGGAGATTCTATAATGAGCAGGGCAGGTTCATGGAATGGACTTAGCTTCACAGCACTTCCATATCATAAGCAAAGTCCAGTATTTAAATCTGAGTTTGTTTTGAATGAAAAGGAAATATTCTATGAGTTCCAAGTCCTTGACAATTCTACTTTTTTTAGATACATCATGACATCTTCGGGGAATCGGCAGCTTTTGCATTGGACAAGTGAAACCAATGTTCAAAGAGAGTGGGATATGTCATATTGGTCTAATGGTTGTGTTAGGATCACTCCATTAAGTTGTAGCAAAGATGGGTTCATGAAGTACACGGGGATTATTCTTCCTGACACGTCTTCATCTAGGTATAATAAGACCATTGACCTTCAAGAATGTGAGAGTTTATGTCTGCAAAACTGTTCCTGTACAGCATATGCAAATTTGGATAAGCGCGACGGAGGAAGTGGCTGCTTACTTTGGTTCGGTGATCTGATTGATATGAGACAATCATATGAAGGTGGCCAAGATATTTATATTCGAGTTCCTTCTTCGGAGCTAGAACATAACAAGAAGATTTACAAAAAGAAGCTTGTAGGCATCATTACTGGCTCTGCTGTATTCATGATATGCTTAATACTTGGACTTGCCATATGGATGTCGAAAGTGGGTTTCTGGAAAGAATTATTATGCAGAAGGGTGGAGGAGGACAGTGATATTCCAACATTTGATTTATCAACCATATTTTATGCCACAAATTGCTTTTCTAGCTACAACAAATTAGGAGCAGGTGGCTTCGGACTTGTGTACAAGGGTGTGCTTGCTGATGGCACTGAGATCGCTGTCAAGAGGCTTTCGAAGAATTCTGAGCAAGGACAGCAAGAGTTCAAAACTGAAGTGCAGTTAATTGCTAAACTTCAGCATCGCAATCTTGTAAAGCTTCTCGGTTGTTGCATTAAACAAAAAGAGAAACTCTTGATTTACGAGTTCATGCCAAACAGAAGTTTGGACCACTTTATTTTTGATGATGGTAGAAGAAAATTATTAGATTGGACTAAGCGCTTCCAAATTATTAGTGGGATAGCTCGAGGCCTACTTTATCTACATCATGACTCAAGGCTAAGAATCATCCACAGAGATCTTAAAACAAGTAACATTCTTCTTGACAATGATATGAATCCAAAAATATCAGACTTTGGTCTCGCAAGGACATTTGGTGGAGATCAAACCGAGGCCTGTACAAGGAGAGTGATGGGAACTCATGGTTATATCTCTCCTGAGTACGCAATGCATGGCTCTTTCTCGATGAAATCTGATGTGTTTAGCTTTGGCGTAATTATGCTTGAGGTCGTTAGTGGGATGAAGAACAAGGAACTCTCTATCCCGCACCAATTTGTTAACCTTCTTGGACATGCATGGGAATTGTGGACTAAGGAGAGGGCTATGGAGCTTGTAGATAAATCGCTTGGTGATTCAGTTGTTGAAGCTCAAGTATTGAGATGCATTCACATAGGGCTTTTGTGTGTGCAAGAGAGACCAGAACACAGGCCTAACATGTCATCAGTAATCCATATGCTCAATGATGATAAGCCGCTTGCTCGGCCAAAGCAGCCAGCATTTTATCCTCACCAAGAAAGTAATTCTTCAACTAAAACTAGTGAAATGTGTTCAAATAATGATATTTCCATCACACTGTTGGAGGCCAGATAG 1869 0.3981 NLLWQSFDYPCDTLLPGMKLGWNLETGLNRFLTCWKSTDDPDSGDYSFKIDLRGYPQAVQLKGDSIMSRAGSWNGLSFTALPYHKQSPVFKSEFVLNEKEIFYEFQVLDNSTFFRYIMTSSGNRQLLHWTSETNVQREWDMSYWSNGCVRITPLSCSKDGFMKYTGIILPDTSSSRYNKTIDLQECESLCLQNCSCTAYANLDKRDGGSGCLLWFGDLIDMRQSYEGGQDIYIRVPSSELEHNKKIYKKKLVGIITGSAVFMICLILGLAIWMSKVGFWKELLCRRVEEDSDIPTFDLSTIFYATNCFSSYNKLGAGGFGLVYKGVLADGTEIAVKRLSKNSEQGQQEFKTEVQLIAKLQHRNLVKLLGCCIKQKEKLLIYEFMPNRSLDHFIFDDGRRKLLDWTKRFQIISGIARGLLYLHHDSRLRIIHRDLKTSNILLDNDMNPKISDFGLARTFGGDQTEACTRRVMGTHGYISPEYAMHGSFSMKSDVFSFGVIMLEVVSGMKNKELSIPHQFVNLLGHAWELWTKERAMELVDKSLGDSVVEAQVLRCIHIGLLCVQERPEHRPNMSSVIHMLNDDKPLARPKQPAFYPHQESNSSTKTSEMCSNNDISITLLEAR 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01282 622 MobiDBLite consensus disorder prediction 587 608 - -
Aip08g01282 622 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 2 135 - -
Aip08g01282 622 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 137 622 - -
Aip08g01282 622 Pfam PAN-like domain 156 221 IPR003609 -
Aip08g01282 622 Pfam Protein tyrosine and serine/threonine kinase 311 579 IPR001245 GO:0004672|GO:0006468
Aip08g01282 622 Gene3D Transferase(Phosphotransferase) domain 1 384 591 - -
Aip08g01282 622 Gene3D Hepatocyte Growth Factor 154 232 - -
Aip08g01282 622 SUPERFAMILY Protein kinase-like (PK-like) 292 579 IPR011009 -
Aip08g01282 622 SMART serkin_6 308 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01282 622 Pfam S-locus glycoprotein domain 69 143 IPR000858 GO:0048544
Aip08g01282 622 SMART ntp_6 156 235 IPR003609 -
Aip08g01282 622 CDD STKc_IRAK 314 580 - -
Aip08g01282 622 ProSitePatterns Serine/Threonine protein kinases active-site signature. 429 441 IPR008271 GO:0004672|GO:0006468
Aip08g01282 622 ProSiteProfiles PAN/Apple domain profile. 156 236 IPR003609 -
Aip08g01282 622 Gene3D Phosphorylase Kinase; domain 1 279 383 - -
Aip08g01282 622 Pfam D-mannose binding lectin 2 36 IPR001480 -
Aip08g01282 622 ProSitePatterns Protein kinases ATP-binding region signature. 314 336 IPR017441 GO:0005524
Aip08g01282 622 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 2 135 - -
Aip08g01282 622 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 137 622 - -
Aip08g01282 622 ProSiteProfiles Protein kinase domain profile. 308 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01282 622 CDD PAN_AP_plant 152 236 - -
Aip08g01282 622 MobiDBLite consensus disorder prediction 594 608 - -
Aip08g01282 622 SUPERFAMILY alpha-D-mannose-specific plant lectins 2 41 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01282 Aip-Chr8 19394917 19397870 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01282 287 622 Receptor kinase-like Gene Family AT3G45860 54.366 5.35e-125 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip08g01282 PK_Tyr_Ser-Thr 8.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01282 - - ahf:112769728 1248.42