Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01281 ATGCAGAACTTGAAGGTTCTGCTATGGTTTTGGTCTTTCCTATTCTCACTTATATTAAGAACCTCCACTTCAATGGACAGTATAGCCCTGAGTCAGTCCATCAGTGATGGAGAGACATTAATTTCGCGCGGAGGAACCTTTGAAGTTGGCTTCTTTAAACCAGGAAACTCAAATAGCCAATACTTCGGCATCTGGTATTATAATGTGTCCCCTTTAACAGTAGTATGGGTGGCCAATAGAGAAAAACCACTCAACAACACATCTGGAATTCTAAAAGTCACTGATCAAGGACTTGTTCTTGTTGATGGCAGCACCAACAGCACTGTGTGGTCCTCCAACATGTCAAGAAAATCAGAGAATCGGAATCTAGTTGCGCAGATCTTGGACTCAGGAAACCTTGTTGTTAAAGATGGACATGATGAGAAGCAAATTCTGTGGCAGAGCTTTGATTATCCCAGTGACACATTCTTGCCAGGAATGAAGCTTGGATTGGATCTTGTGACAGGCCTAGAGAGATCTGTATCGTCGTGGAAGAGCACCGATGATCCTAGCCGTGGATACTACGAAGCTAAAATAGACCGTAGAGGCTATCCACAAGTAGTTATAACAAATGGAACCGTTATAATGGTTAGATTAGGACCATGGACTGGTCTTACTTTCTCAGGGGCTACACTTTACTTGCGCTATACTCAACTGTCAAATGAATTTGTATTCAATGAGAAAGAGATATTTTATGAGTACAATCTTTTGAATATATCTAATTTTGTGAGAATTGTGGTGACAACTTGGGGAAATCTTCAGTCTTTTCATTGGTTAAGACAAACCGGCAGCTGGGAGACTCTTCTTTCAATGCCGGCGACACAATGTGACAAGTATGCAGTGTGTGGTGCAAATTCTATCTGTAGTGTCTTTAACACTGCATTTCCAACCTGTGCATGCCTGAACGGATTTGAACCAAATTATCCTGAAAAATGGAAGGAATCACATTGGTCTGATGGTTGTGTTAGGATCACTCCATTGAGCTGCAGCAAAGATGGATTTAAGAAGCTCACAAACATGGTGCTGCCTGACACATCTTCTTCCTGGTACAACAAGACCATGAACTTGCAAGAATGTGAGGATTTGTGTCTGAAAAATTGTTCTTGCACAGCATATGCTAATTTGGATATCCGCGGCCAAGGAAGTGGGTGCTTAATTTGGTTTCATGATCTCATTGACATGAAAGAAGGGGTAAATGAACTTTATATCCGAACAACTATTTCAGATCTAGAAGATAATCAGAACAATGATTCCAGCAAGAAGAAGCTAGCAGGAATCATCGTTGGATCCGCATTGTTAGTCATGTGCTTAGTACTTGGACTGGCAATCTATGTATGGAGAAACAAACCTAAGAAGCCAGAAATATTCTGCTGGAAGCAACATGCTTGCAAAATAGAAAATGAGGATGTTGATCTTCCAAGCTTTGAGTTATCAACCATAGCTTCTGCCACTAATCACTTCTCTAATGGCAACAAATTAGGTGAAGGTGGATTTGGACCTGTGTACAAGGGTGTACTCGCAAATGGGGTAGAGATTGCTGTCAAGAGGCTTTCCAAGAATTCTCAGCAAGGACTTCAGGAGTTCAAAACTGAAGTTCAGTTAATTGCTAAACTTCAGCATCGCAATCTTGTAAAACTTCTTGGTTGTTGCATTCAACAAAAAGAGAAGCTCTTGATTTATGAGTTCATGCCCAATAGGAGTTTGGACTACTTCATTTTTGATGATTCTAGAAGAAAATTATTAGATTGGGCAAAGCGCTTTCAAATTATTAGCGGAACAGCCCGAGGCCTAGTTTATTTACATCAAGATTCTAGGCTAAGAGTGATTCATAGAGATCTAAAAACTAGCAATATACTTCTTGATAAAGACATGAACGCGAAAATATCAGACTTTGGTCTTGCTAGGGCATTTGCCGGAGATCAAACTGAGGCCAGAACAAAAAGAGTGATGGGAACTTATGGCTATATTTCTCCTGAGTATGCCGTGCGTGGATCCTTCTCAATGAAATCTGATGTGTTCGCTTTTGGTGTAATTGTGCTTGAGATAGTAAGTGGGAAGAAGAACAGAGAGTTCTGTGTCCCTCACCAGAGTCTTAACCTTCTTGGACATGCATGGGAGCTCTGGAATGAGGAGAGGCCCTTGGAACTGGTGGATGAATCAGTGCGCGATTCGGTGATTGAAGTTGAAGCATTGAGATGCATACACATAGGGCTGTTATGTGTTCAAGGGAGACCCGAAGATAGACCTAACATGTCATCTGTAGTTCGTATGCTGGAAGATGATAAACCATTGCCCAATCCGAGGCTGCCGGCATTTTACTCACACCAGGAAGAATCTATGGGAAGAGATGATGGAGTTTCAGCAAATGAGGTTACCATATCATTGTTAGGGGCAAGATAG 2439 0.4141 MQNLKVLLWFWSFLFSLILRTSTSMDSIALSQSISDGETLISRGGTFEVGFFKPGNSNSQYFGIWYYNVSPLTVVWVANREKPLNNTSGILKVTDQGLVLVDGSTNSTVWSSNMSRKSENRNLVAQILDSGNLVVKDGHDEKQILWQSFDYPSDTFLPGMKLGLDLVTGLERSVSSWKSTDDPSRGYYEAKIDRRGYPQVVITNGTVIMVRLGPWTGLTFSGATLYLRYTQLSNEFVFNEKEIFYEYNLLNISNFVRIVVTTWGNLQSFHWLRQTGSWETLLSMPATQCDKYAVCGANSICSVFNTAFPTCACLNGFEPNYPEKWKESHWSDGCVRITPLSCSKDGFKKLTNMVLPDTSSSWYNKTMNLQECEDLCLKNCSCTAYANLDIRGQGSGCLIWFHDLIDMKEGVNELYIRTTISDLEDNQNNDSSKKKLAGIIVGSALLVMCLVLGLAIYVWRNKPKKPEIFCWKQHACKIENEDVDLPSFELSTIASATNHFSNGNKLGEGGFGPVYKGVLANGVEIAVKRLSKNSQQGLQEFKTEVQLIAKLQHRNLVKLLGCCIQQKEKLLIYEFMPNRSLDYFIFDDSRRKLLDWAKRFQIISGTARGLVYLHQDSRLRVIHRDLKTSNILLDKDMNAKISDFGLARAFAGDQTEARTKRVMGTYGYISPEYAVRGSFSMKSDVFAFGVIVLEIVSGKKNREFCVPHQSLNLLGHAWELWNEERPLELVDESVRDSVIEVEALRCIHIGLLCVQGRPEDRPNMSSVVRMLEDDKPLPNPRLPAFYSHQEESMGRDDGVSANEVTISLLGAR 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01281 812 CDD B_lectin 31 152 IPR001480 -
Aip08g01281 812 Gene3D Phosphorylase Kinase; domain 1 474 575 - -
Aip08g01281 812 CDD STKc_IRAK 506 772 - -
Aip08g01281 812 Pfam D-mannose binding lectin 73 178 IPR001480 -
Aip08g01281 812 SMART blect_4 31 152 IPR001480 -
Aip08g01281 812 CDD PAN_AP_plant 338 418 - -
Aip08g01281 812 PIRSF SRK 1 812 IPR024171 GO:0004674
Aip08g01281 812 ProSitePatterns Serine/Threonine protein kinases active-site signature. 621 633 IPR008271 GO:0004672|GO:0006468
Aip08g01281 812 PANTHER - 13 792 - -
Aip08g01281 812 SMART ntp_6 342 419 IPR003609 -
Aip08g01281 812 ProSiteProfiles Bulb-type lectin domain profile. 25 148 IPR001480 -
Aip08g01281 812 Pfam S-locus glycoprotein domain 211 320 IPR000858 GO:0048544
Aip08g01281 812 Pfam Protein tyrosine and serine/threonine kinase 502 771 IPR001245 GO:0004672|GO:0006468
Aip08g01281 812 SUPERFAMILY Protein kinase-like (PK-like) 483 787 IPR011009 -
Aip08g01281 812 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 183 IPR036426 -
Aip08g01281 812 Pfam PAN-like domain 342 407 IPR003609 -
Aip08g01281 812 ProSiteProfiles PAN/Apple domain profile. 342 419 IPR003609 -
Aip08g01281 812 SMART serkin_6 500 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01281 812 ProSiteProfiles Protein kinase domain profile. 500 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01281 812 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 13 792 - -
Aip08g01281 812 Gene3D Transferase(Phosphotransferase) domain 1 576 777 - -
Aip08g01281 812 Gene3D Hepatocyte Growth Factor 340 416 - -
Aip08g01281 812 Gene3D - 20 149 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01281 Aip-Chr8 19338922 19393246 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01281 450 802 Receptor kinase-like Gene Family AT3G45860 53.186 1.41e-122 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip08g01281 PK_Tyr_Ser-Thr 2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01281 - - ahf:112769728 1541.94