Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01280 ATGTTAAGAACCTCCACCTCGCTGAACAATATAACCTCTATTCAATCCCTCAGCGATGGAGAGACATTGATTTCACATGAAGGAATCTTTGAACTAGGTTTCTTCAGTCCTGGAAACTCAAAGGGCCGATATGTTGGTATCTGGTACCACAATATGTCCCCTTTAACAGTTGTGTGGGTTGCCAACAGAGAAACTGCACTCAATGATACCTCTGGAGTTTTAAAAGTAACCCATCAAGGACTTGTTCTCCTTGTTAATGGCACCAGCAACAGCACTGTGTGGTCTTCCACCATGTCAGGGAAAGCGGAGAATCCGGTTGCACAGCTCCTGGTCTCAGGAAATCTTGTTGTCAAAGATGGCCATAATGGGGAGCACTTCTTGTGGCAGAGTTTTGATTTTCTTGGTGATACACTCTTGCCAGGATCAAAGATAGGTTGGGATCCAGTGACGGGGCTAGAGAGAACTTTAACATCTTCGAGAAGTGCTGATGATCCTGGCCATGGAGACTTCAAATTTAGAATAGACCCCAGAGGCATTCCACAAGCTGTTCTAACAAATGGAACTGTCATAATGGTCAGAGTGGGACCCTGGAATGGACTTGTGTTTTCAGGAGCTACAATTTATTTGCGCTATACTAAAATACTGCCAACTGATCATGATTTCCGTGAAAAGGAGCTAATTTTAACCGACAAGAAAAAGAAGGAAGATTTATCATTTGAAGAGGAACCGGTGGCTATAGTTGATCGCCAAGTAAAGAAACTACGTTCTAAAGAGATAGCGTCTGTGAAGGTTGTTTGGAAGAATCATTCGGTAGAAGAAGCAACTTGGGAAGTAGAGGACGCTATGCGCGACAAATATCCGTATTTGTTTGAGTCCGAAGATTATGTCAATGCTCCATATGCCACAGGCAGGATCCTCGTGAGGGATTGTCCAAATCCTAGAGGAGGCTTTGCTCCAAGTATTGCACGTCCTACAACACCAATGCCATCATCTTCAGCTATGTCTATTGAAAATTCTTCTGGTCCTAGTGGCAGAGGAGCAGGTGGCAGGGGTCAGACTTATAACAGAGGAGGGAGCCAAAGAGGAAGAGGTCAGGCACGTGTGTATGCTTTAACACGTCAAGATGCTCAAGCTTCTATTGCTGTGGTGGCAGAACCAATGGAAGATATTGATGTCATCTTAGGCATGGATTGGTTAGCAGCTTGTCATACTGATGTGGGCTGTTACTCCAAAACTGTGAAGTTTGACATACCGGatgccctcagtagaaaatctatgggtagcttggCCCATATCACTCTTGCAAGGAGACCAATTGTTGAAGAAGTCCATCAATTGGAGGCCGGTGGAATTCAATTTGACATTGGAGAATCAGGAGTTTTCTTAGCACATGTTCGAGCCCAATCTTCCCTAATAGAACAGATCAAGGCTGCACAACGTGATGACCCGAAACTAAGAAAGCTTATAGAAGATGTTCGCAATGGGAGAAACTCAAAATTTTCTCTTGATCAAGATGTCTTGCGTTGTGGTCAACGCTTATGtgtgccagataaccacgacttgaagaaagctattttggaggaggctcacaattctaaATACGGGAGTCATTCCAGGTTCCATTCCACCTGCTCCTCAGTAGATCATAGTCATTTTGGTGAGCCATTCTTCTTTTCAAGGGCTAAGTATTATGGAATTAATATTCATGTTGGTAAGGTCCTAGAAACAGAGGAGATTCTGTCCGTTTTTCTGAAATTTTGGTCGTTTGACTTGCTGAGGGACTTGTCCCTTGAGCGCCAGTCATGGCCAGAAAAAGCTTGTAGGCATGATTGTTGGCAACATTTTGTTCTTTATGAGCATGATGTTGGACTGGTTCTATGTCTATGGAGAAAGATACTTGAGGAGCCAGAAATATTTTGGTGGAAGCAATGGGCTCACAAAAGGGAAAAAGATGACATGGATCTGCCAATATTTGATTTATCAACCGTAGTTTATGCCACTAATTACTTCTCTAGTGACAACAAATTGGGAGAAGGTGGATTTGGATCGGTATACAAGGGTGCACTTGAAAATGGGACAGAGATTGCAGTCAAGAGGCTTTCCATTGACTCTGAACAAGGACTGGATGAACTTAAAAATGAAGTTCAGTTAATTGCAAAACTTCAGCATCGCAATCTTGTAAAGCTTCTTGGTTGCTGCATTCAGCCAAACGAAAAACTCTTGATTTATGAGCTCGTGCCCAATAGGAGTTTGGACACTTTTATTTTTGATGATTCTAGAAGAAAATTATTAGATTGGGCGAAGCGCTTTCAAATTATAGGCGGGACAGCTCGAGGACTAGTTTATTTACATCAGGATTCTAGGCTAAGAGTTATTCACAGAGATCTAAAAGCTAGCAATATCCTTCTTGATAAAGACATGAACGCGAAAATATCAGACTTTGGTCTTGCTAGGACATTTGCCGGAGATCAATCTGAGGCCACAACAAAAAGAGTGATGGGAACTTATGGCTATATTTCTCCTGAGTATGCAGTGCACGGATCCTTCTCAACGAAATCTGATGTGTTCGCCTTTGGCGTAATTGTGCTTGAGATAGTCAGTGGGAAGAAGAACAGAGAGTTTTGCGTCCCTCACCAACGTCTCTACCTTCTTGGACATGCATGGGAGCTCTGGAATGAGGAGAGGCCTTTGGAGCTAGTGGATGAATCAGTGCGCGATTCGGTCATTGAAGTTGAAGCATTGAGATGCATACAGATAGGGCTTTTATGTGTTCAAGGGAGACCAGAAGATAGGCCTAACATGTCATCTGTAGTTCGTATGCTGGAAGATGATAAACCGTTGCCTGAGCCGAGGCTGCCGGCGTTTTACTCGCACCATGAAGAATCTCTGGGAAGAGATGATGAAGTTTCAGCAAATGAGGTTACCGTTTCATCGTTAGGGGCAAGATAG 2949 0.4201 MLRTSTSLNNITSIQSLSDGETLISHEGIFELGFFSPGNSKGRYVGIWYHNMSPLTVVWVANRETALNDTSGVLKVTHQGLVLLVNGTSNSTVWSSTMSGKAENPVAQLLVSGNLVVKDGHNGEHFLWQSFDFLGDTLLPGSKIGWDPVTGLERTLTSSRSADDPGHGDFKFRIDPRGIPQAVLTNGTVIMVRVGPWNGLVFSGATIYLRYTKILPTDHDFREKELILTDKKKKEDLSFEEEPVAIVDRQVKKLRSKEIASVKVVWKNHSVEEATWEVEDAMRDKYPYLFESEDYVNAPYATGRILVRDCPNPRGGFAPSIARPTTPMPSSSAMSIENSSGPSGRGAGGRGQTYNRGGSQRGRGQARVYALTRQDAQASIAVVAEPMEDIDVILGMDWLAACHTDVGCYSKTVKFDIPDALSRKSMGSLAHITLARRPIVEEVHQLEAGGIQFDIGESGVFLAHVRAQSSLIEQIKAAQRDDPKLRKLIEDVRNGRNSKFSLDQDVLRCGQRLCVPDNHDLKKAILEEAHNSKYGSHSRFHSTCSSVDHSHFGEPFFFSRAKYYGINIHVGKVLETEEILSVFLKFWSFDLLRDLSLERQSWPEKACRHDCWQHFVLYEHDVGLVLCLWRKILEEPEIFWWKQWAHKREKDDMDLPIFDLSTVVYATNYFSSDNKLGEGGFGSVYKGALENGTEIAVKRLSIDSEQGLDELKNEVQLIAKLQHRNLVKLLGCCIQPNEKLLIYELVPNRSLDTFIFDDSRRKLLDWAKRFQIIGGTARGLVYLHQDSRLRVIHRDLKASNILLDKDMNAKISDFGLARTFAGDQSEATTKRVMGTYGYISPEYAVHGSFSTKSDVFAFGVIVLEIVSGKKNREFCVPHQRLYLLGHAWELWNEERPLELVDESVRDSVIEVEALRCIQIGLLCVQGRPEDRPNMSSVVRMLEDDKPLPEPRLPAFYSHHEESLGRDDEVSANEVTVSSLGAR 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01280 982 ProSiteProfiles Bulb-type lectin domain profile. 8 130 IPR001480 -
Aip08g01280 982 SUPERFAMILY Protein kinase-like (PK-like) 655 942 IPR011009 -
Aip08g01280 982 Pfam Protein tyrosine and serine/threonine kinase 673 941 IPR001245 GO:0004672|GO:0006468
Aip08g01280 982 SMART serkin_6 670 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01280 982 ProSitePatterns Serine/Threonine protein kinases active-site signature. 791 803 IPR008271 GO:0004672|GO:0006468
Aip08g01280 982 PANTHER - 638 977 - -
Aip08g01280 982 Gene3D Phosphorylase Kinase; domain 1 644 745 - -
Aip08g01280 982 MobiDBLite consensus disorder prediction 959 982 - -
Aip08g01280 982 CDD STKc_IRAK 676 942 - -
Aip08g01280 982 Gene3D - 4 131 IPR036426 -
Aip08g01280 982 MobiDBLite consensus disorder prediction 324 346 - -
Aip08g01280 982 ProSitePatterns Protein kinases ATP-binding region signature. 676 698 IPR017441 GO:0005524
Aip08g01280 982 PANTHER - 2 215 - -
Aip08g01280 982 PANTHER - 638 977 - -
Aip08g01280 982 Pfam D-mannose binding lectin 56 160 IPR001480 -
Aip08g01280 982 SMART blect_4 14 134 IPR001480 -
Aip08g01280 982 Pfam Retroviral aspartyl protease 375 415 - -
Aip08g01280 982 SUPERFAMILY alpha-D-mannose-specific plant lectins 56 199 IPR036426 -
Aip08g01280 982 MobiDBLite consensus disorder prediction 316 362 - -
Aip08g01280 982 Gene3D Transferase(Phosphotransferase) domain 1 746 947 - -
Aip08g01280 982 CDD B_lectin 15 133 IPR001480 -
Aip08g01280 982 ProSiteProfiles Protein kinase domain profile. 670 952 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01280 982 PANTHER - 2 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01280 Aip-Chr8 19308447 19318140 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01280 648 963 Receptor kinase-like Gene Family AT4G11480 55.140 5.47e-117 371
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip08g01280 PK_Tyr_Ser-Thr 1.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01280 - - aip:107611884 759.985