Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01277 ATGAAAGCATTTAGCTTTCTCTTATTTTGCTTCTCTCTGCTTATGGCTGTCTCTATTGCAAGAGACACAATCAACACACTGCAATCTATAAGTGATGGTGAGATATTAGTTTCAGCAGATGAAACCTTTGCGTTGGGATTCTTCAGCCCTGGAACTTCCAAGAACCGTTATGTCGGAATTTGGTTTAACAAAGATCCAACAAAGGCAATAGTATGGGTTGCAAACAGAGAAAAACCCCTCACTGACTCCTCAGGGGTTTTGAAGGTCAGCGACATCGGAATTCTAGTCCTTCTTGACAGTAATAATAGTCTTATCTGGTCATCCAACACGACGCGATCGGGGCAAAATCCGGTTGCAAAGCTTTTGAATTCTGGGAATTTTGTTGTGCAGGATGACAGCAATAGCGACACGGAAGATTTTGTGTGGCAAAGTTTTGACTATCCAGGCGACACAATCTTGCCTGGACAGAAGTTGGGAAGAAACTTAGCTACAGGACTAAATCGGAGGACAACATCATGGAAAAGCTCTGATGATCCTTCTCCAGGTAGCTTTAGCTATCAATTTGATATTGATGGATATCCGCAATTTGTATTAAGAGAAGGCACAACAAAAAGATTTCGTTCTGGATCATGGAATGGTATTCAATTTAGTGGGGTACCTCAATTGAAAAATGAGTCTGTATTCAGATTTAGCATGATTTCTAATGAGGAAGAGGTGTATATTGTATATTGGAGTGTTGATAGTTCAGTTCATCAGAGGCTGCAGCTAGCAATGGATGGATTCAACCAGCGGAGAAGTTGGAGTGGTGGAAATACAGGTTGGACCACAGTTTCGCACATACCGGTGGATGACTGTGATTATTATGGAAAATGTGGAGCATATGCTAGTTGTGATACAAATCATTTTCCAATGTGTGAATGCTTAGATGGATTTGTGCAGAATACTATTGACTCATCAAGTGGTTGTGTTAGGAGAACCTCATTAAGTTGCAATAACTCAGATGGGTTTGTGAAGTTTTCAGGGCTAAAATTACCAGACACAAAAGGAACTTGGTTTAATACAAGTATGAGTTTTGAGGATTGTAGGATTTTGTGCTTGAAAAACTGCTCTTGTACGGCTTATGCAGCTTTGGATGTCAGTAAAGGGCCAAATTCAAATGGTTGTTTACTTTGGTTTGGAAAGCTGATGGATATGAAAGTGATGACTGCATCTGAAGATATTTATGTAAAGATGGCAGGGAAAGATGTAGAAGCAATTGTGCGAAAAAGATTGCCGAAGTTCAAGAAAAAGAAGCAAAAGATTACCACTGCCATAATCTGGGTGTTGTCTTCTGGAATTTTGATCTTATGCTTGGCCATCATTATTTATAGACGGGAGATGCGTAAGAAAGGTAGAAAGATAAAAGAAGAAAGAGAATCAGATGATTGTCAGCACGATGAGGAAGATCTAGAATTGCCCTTATTTGATATAAATACGGTTACTTCTGCAACAAACAATTTTTCAACTGACAACTTATTAGGGAGAGGTGGTTTTGGACCAGTTTATAAGGGTATCTTGGAAGATGGACAGGAAATAGCTGTCAAGAGGCTTTCGAAGAATTCAAGCCAAGGATTCGAAGAGTTCAAAAATGAAGTTATGCATGTTTCCAAACTTCAGCACAGGAATTTAGTAAGGCTACTAGGAGGTCTTCTTTATCTTCATCAAGATTCAAGACATAGAATAGTTCATAGAGATCTCAAGGCTGGGAATGTTTTGTTAGATGATGAATTGAATCCTAAAATCTCGGACTTTGGAATAGCAAGAAGCTTTGTAGGAAATGAAAGCGAAGCAAATACAAGACATATTGTTGGAACTTATGGCTATCTATCACCAGAGTACATAGTTGGTGGGCTGTACTCAACAAAATCTGATGTCTATAGCTTTGGTGTACTAATATTAGAAATAGTTAGTGGGAAGCGAAATAAAGGATTCATCGATATTGAACACTACTTTAATCTTCTTGCCAATGCATGGACACTTTTAGCCAAAGGCAAGTGCTTAGAAATAGTTGATGCATCGATCAGAGACTCAATTAATTTGCCAGAAGTCATAAGAACAATTCATGTCGGTTTGCTATGTGTGCAACGAAATCCAAAAGATCGACCAAGCATGTCATATGTGCTTATGATGCTGAGTAGTGAATGGGAACTACCTCAGCCAAAGAAGCCAGGGTTCTTTATTGAGAGAGACGTGGTTGGTGACCAATCTACATTAAGCAACAATGAACTCACAGATACACAGGTCCATCCGCGTTAG 2295 0.3922 MKAFSFLLFCFSLLMAVSIARDTINTLQSISDGEILVSADETFALGFFSPGTSKNRYVGIWFNKDPTKAIVWVANREKPLTDSSGVLKVSDIGILVLLDSNNSLIWSSNTTRSGQNPVAKLLNSGNFVVQDDSNSDTEDFVWQSFDYPGDTILPGQKLGRNLATGLNRRTTSWKSSDDPSPGSFSYQFDIDGYPQFVLREGTTKRFRSGSWNGIQFSGVPQLKNESVFRFSMISNEEEVYIVYWSVDSSVHQRLQLAMDGFNQRRSWSGGNTGWTTVSHIPVDDCDYYGKCGAYASCDTNHFPMCECLDGFVQNTIDSSSGCVRRTSLSCNNSDGFVKFSGLKLPDTKGTWFNTSMSFEDCRILCLKNCSCTAYAALDVSKGPNSNGCLLWFGKLMDMKVMTASEDIYVKMAGKDVEAIVRKRLPKFKKKKQKITTAIIWVLSSGILILCLAIIIYRREMRKKGRKIKEERESDDCQHDEEDLELPLFDINTVTSATNNFSTDNLLGRGGFGPVYKGILEDGQEIAVKRLSKNSSQGFEEFKNEVMHVSKLQHRNLVRLLGGLLYLHQDSRHRIVHRDLKAGNVLLDDELNPKISDFGIARSFVGNESEANTRHIVGTYGYLSPEYIVGGLYSTKSDVYSFGVLILEIVSGKRNKGFIDIEHYFNLLANAWTLLAKGKCLEIVDASIRDSINLPEVIRTIHVGLLCVQRNPKDRPSMSYVLMMLSSEWELPQPKKPGFFIERDVVGDQSTLSNNELTDTQVHPR 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01277 764 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 11 561 - -
Aip08g01277 764 Pfam S-locus glycoprotein domain 206 314 IPR000858 GO:0048544
Aip08g01277 764 SUPERFAMILY Protein kinase-like (PK-like) 486 737 IPR011009 -
Aip08g01277 764 SMART serkin_6 500 729 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01277 764 SMART ntp_6 331 411 IPR003609 -
Aip08g01277 764 Pfam PAN-like domain 330 398 IPR003609 -
Aip08g01277 764 ProSitePatterns Serine/Threonine protein kinases active-site signature. 574 586 IPR008271 GO:0004672|GO:0006468
Aip08g01277 764 SMART blect_4 27 148 IPR001480 -
Aip08g01277 764 PANTHER - 562 756 - -
Aip08g01277 764 CDD PAN_AP_plant 326 412 - -
Aip08g01277 764 Gene3D - 15 145 IPR036426 -
Aip08g01277 764 PANTHER - 11 561 - -
Aip08g01277 764 ProSiteProfiles Protein kinase domain profile. 500 729 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01277 764 ProSiteProfiles Bulb-type lectin domain profile. 21 142 IPR001480 -
Aip08g01277 764 PIRSF SRK 562 764 IPR024171 GO:0004674
Aip08g01277 764 PIRSF SRK 1 561 IPR024171 GO:0004674
Aip08g01277 764 Pfam Protein kinase domain 559 720 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01277 764 CDD B_lectin 28 148 IPR001480 -
Aip08g01277 764 SUPERFAMILY alpha-D-mannose-specific plant lectins 70 179 IPR036426 -
Aip08g01277 764 Gene3D Transferase(Phosphotransferase) domain 1 486 561 - -
Aip08g01277 764 ProSiteProfiles PAN/Apple domain profile. 330 412 IPR003609 -
Aip08g01277 764 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 562 756 - -
Aip08g01277 764 Gene3D Transferase(Phosphotransferase) domain 1 562 736 - -
Aip08g01277 764 Pfam D-mannose binding lectin 70 174 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01277 Aip-Chr8 19252117 19255686 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01277 460 763 Receptor kinase-like Gene Family AT4G23140 43.855 8.04e-87 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip08g01277 Pkinase 1.6e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01277 - - adu:107462379 1192.18