Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01276 ATGGCTGTCTCTATTGCAAGAGACACAATCAACACACTGCAATCTATAAGTGATGGTGAGATATTAGTTTCAGCAGATGAAACTTTTGCATTAGGATTCTTCAGCCCTGGAACTTCCAAGAACCGTTATGTCGGAATTTGGTTTAACAAAGATCCAACAAAGGCAATAGTATGGGTTGCAAACAGAGAAAAACCGCTCACTGACTCCTCAGGGGTTTTGAAGGATGACACCAATAGCGAAAAGGAAGATTTTGTGCGGCAACGTTTTGACTATCCAGGCGACACAATCTTGCCTGGACAGAAGTTGGGAAGAAACTTAGCTACAGGACTAAATCGGAGGACAACATCATGGAAAAGCTCTGATGATCCTTCTCCAGGTAGCTTTAGCTATCAATTCGATATTGATGGATATCCGCAATTAGTATTAAGAGAAGGCACAACAAAAAGATTTCGTTTTGGATCATGGAATGGTATTCAATTTAGTGGGGCACCTCAATTGAAAAATGAGTCTGTATTCAGATTTAGCATGATTTCTAATGAGGAAGAGGTGTATATTGTATATTGGAGTGTTGATAGTTCAGTTCATCAGAGGCTGCAGACAGCAACGGATGGATTCAGCCAGCGGAGAAGTTGGAGGGGTGGAAATACAGGTTGGACCACAGTTTCGCACATACCGGTGGATGACTGTGATTATTATGGAAAATGTGGAGCATATGCTAGTTGTGATACAAATAGGTTTCCCATGTGTAATTGCTTGGATGGATTTGTGCAGAATACAACTGATTCATCATGTGGTTGTGTTAGGAGAACCTCATTGAGTTGCAATCATTCAGATGGGTTTGTGAAGTTTTCGGGGCTAAAGTTACCAGACACTGAAGGGACATGGTTTAATACAAGTATGAGTTTTGAGGATTGTAGAATTTTGTGCGTGAAAAACTGCTCTTGTACGGCTTATGCAGCTTTGGATGTCAGTGAAGGGCCAAATTCAAATGGTTGTTTACTTTGGTTTGGTAATCTGATGGATATGAAAGTGATGACTACATCTGAAGATATTTATGTAAAGATGGCAGGGAAAGATGTAGAAGCAATTGTACAAAAAAGATTGCCGAAGTTCAAGAAAAAGAAGCAAAAGATTACCACTGCCGTAATCTGGGTGCTGTCTTCTGGAATTTTGATCTTATGCTTGGCCGTCATCATTTATAGATGGGAGATGCGTAAGAAAGGAAAGATAAAAGAAGAAAGAGAATCAGATGCAATAAATAGTCAGCATGATGAGGAAGATCTAGAATTGCCCTTATTTGATTGTGAGAAGGGAAAGCTACTAGATTGGGCGAAGCGTTTTCATATCATCAATGGGATTGCCAGAGGCCTTCTTTATCTTCATCAAGATTCAAGACATAGAATAGTTCATAGAGATCTCAAGGCCGGGAATGTTTTGTTAGATGATGAATTGAATCCTAGAATCTCGGACTTTGGACTAGCTAAGAAATGA 1491 0.3984 MAVSIARDTINTLQSISDGEILVSADETFALGFFSPGTSKNRYVGIWFNKDPTKAIVWVANREKPLTDSSGVLKDDTNSEKEDFVRQRFDYPGDTILPGQKLGRNLATGLNRRTTSWKSSDDPSPGSFSYQFDIDGYPQLVLREGTTKRFRFGSWNGIQFSGAPQLKNESVFRFSMISNEEEVYIVYWSVDSSVHQRLQTATDGFSQRRSWRGGNTGWTTVSHIPVDDCDYYGKCGAYASCDTNRFPMCNCLDGFVQNTTDSSCGCVRRTSLSCNHSDGFVKFSGLKLPDTEGTWFNTSMSFEDCRILCVKNCSCTAYAALDVSEGPNSNGCLLWFGNLMDMKVMTTSEDIYVKMAGKDVEAIVQKRLPKFKKKKQKITTAVIWVLSSGILILCLAVIIYRWEMRKKGKIKEERESDAINSQHDEEDLELPLFDCEKGKLLDWAKRFHIINGIARGLLYLHQDSRHRIVHRDLKAGNVLLDDELNPRISDFGLAKK 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01276 496 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 3 74 - -
Aip08g01276 496 CDD PAN_AP_plant 270 356 - -
Aip08g01276 496 Gene3D - 2 155 IPR036426 -
Aip08g01276 496 PANTHER - 72 435 - -
Aip08g01276 496 PANTHER - 3 74 - -
Aip08g01276 496 PANTHER - 432 495 - -
Aip08g01276 496 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 432 495 - -
Aip08g01276 496 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Aip08g01276 496 SUPERFAMILY Protein kinase-like (PK-like) 432 495 IPR011009 -
Aip08g01276 496 Gene3D Transferase(Phosphotransferase) domain 1 423 496 - -
Aip08g01276 496 SUPERFAMILY alpha-D-mannose-specific plant lectins 56 123 IPR036426 -
Aip08g01276 496 Gene3D Hepatocyte Growth Factor 270 356 - -
Aip08g01276 496 ProSiteProfiles Bulb-type lectin domain profile. 7 155 IPR001480 -
Aip08g01276 496 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 72 435 - -
Aip08g01276 496 Pfam D-mannose binding lectin 77 118 IPR001480 -
Aip08g01276 496 ProSiteProfiles PAN/Apple domain profile. 274 356 IPR003609 -
Aip08g01276 496 Pfam Protein kinase domain 444 496 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01276 496 Pfam PAN-like domain 274 342 IPR003609 -
Aip08g01276 496 SMART blect_4 13 123 IPR001480 -
Aip08g01276 496 Pfam S-locus glycoprotein domain 150 258 IPR000858 GO:0048544
Aip08g01276 496 ProSiteProfiles Protein kinase domain profile. 317 496 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01276 496 SMART ntp_6 275 355 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01276 Aip-Chr8 19236864 19239754 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01276 392 495 Receptor kinase-like Gene Family AT4G21410 51.923 4.78e-25 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip08g01276 S_locus_glycop 8.4e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01276 - - adu:107462379 671.774