Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01275 ATGGAAGCCTTTAGCCTTCTCCTGTTATGCTTCTCTCTGCTGAATTTAATACCATTTTGTGCTCCAAGAGACACAATTAACACACTGCAATCTATCAGTGATGGTGAGACATTAGTTTCAGCAGATGAAACCTTTGCATTGGGATTCTTCAGCCCTGGAACTTCCAAGAACCGTTATGTTGGAATTTGGTATAACAAAGATCCAAAAAAGGCAATAGTATGGGTTGCAAACAGAGAAACACCCCTCACTGACTCCTCAGGGGTTTTGAAGGTCAACACCACCGGAATTCTAGTCCTTCTTGATAGTAATAATAGTCTTATCTGGTCATCCAACACGACAGGATCGGCACGAAAAGCAATTGAACAAAATAGATCAACGAAGTCCAAGAAACGGAAGCAAAAGATTATCATTGCCGTAAGCTGTGTGTTATCTTTTGGAATTTTGATCCTATGCTTGGCCTTCATAATCTATGGATGGAAGAAGTATCACAAAGGAAAGATAAAAGAAGAAACAGAATCAGGTGCAATAAATAGTCACCATGATGAGGATGATCTGGAACTGCCCTTATTTGATATGTGCACAATTACTTCTGCAACAAGTAATTTTTCAAGTGACAATATACTAGGGACAGGTGGTTTTGGATCAGTTTATAAGGGTATCTTGGAAAATGGACGGGAAATAGCTGTCAAGAGACTTTCACAAAATTCAAGCCAAGGACTCCAAGAGTTCAAAAATGAAGTTATGCATATTGCCAAACTTCAGCACAGAAATTTAGTGAAGCTATTAGGGTATTGCATTCAAGCAGGGGAGAGAATATTGATTTATGAATTTATGCGCAACAAAAGCTTGGACTTCTTTATATTTGATTGTGAGAAGGGAAAGCTTCTAGACTGGCCAAAGCGTTTTCTTATTATTAATGGAATTGTTAGGGGTCTTCTCTATCTTCATCAAGATTCAAGACATAGAATAGTTCATAGAGATCTTAAGGCTGGAAATATTTTGTTAGATGACGAATTGAATCCTAGAATTTCAGACTTTGGACTAGCAAGAAGCTTTGTAGGAAATGAAAACCAAGCAAATACAAGGCACATTGTTGGAACTTACGGCTATCTGTCACCGGAGTACATAGTTGATGGGATATACTCAACAAAATCTGATGTCTACAGCTTCGGAGTACTGGTGTTAGAGATAGTTAGCGGGAAGAGAAACAGAGGATTCATCCATATTGATCACAATTTTAATCTGCTTGGGCATGCATGGACACTTTTCTCAGAAGGCAAGTGCTTACAAATAGTCGATCCATCTATCAAAGACTCTATTGATTTGCCAGAAGTCCTAAGATCAATTCATGTTGGTCTGCTATGCGTGCAACTAAATTCCGAGGATCGACCAAGCATGTCGTGTGTGCTTACGATGCTGAGTAGTGAATGGGCATTGCCTCAGCCAAAGAAGCCAGGGTTCTTTATTGAGAGAGATGTGGTTGGTAACCGTTCTTCGTCAAGCAACAATAAACTACTGTCTGTTAATAATCTAACAGCTACTCAGGTCTGTCCCCGATAG 1560 0.3936 MEAFSLLLLCFSLLNLIPFCAPRDTINTLQSISDGETLVSADETFALGFFSPGTSKNRYVGIWYNKDPKKAIVWVANRETPLTDSSGVLKVNTTGILVLLDSNNSLIWSSNTTGSARKAIEQNRSTKSKKRKQKIIIAVSCVLSFGILILCLAFIIYGWKKYHKGKIKEETESGAINSHHDEDDLELPLFDMCTITSATSNFSSDNILGTGGFGSVYKGILENGREIAVKRLSQNSSQGLQEFKNEVMHIAKLQHRNLVKLLGYCIQAGERILIYEFMRNKSLDFFIFDCEKGKLLDWPKRFLIINGIVRGLLYLHQDSRHRIVHRDLKAGNILLDDELNPRISDFGLARSFVGNENQANTRHIVGTYGYLSPEYIVDGIYSTKSDVYSFGVLVLEIVSGKRNRGFIHIDHNFNLLGHAWTLFSEGKCLQIVDPSIKDSIDLPEVLRSIHVGLLCVQLNSEDRPSMSCVLTMLSSEWALPQPKKPGFFIERDVVGNRSSSSNNKLLSVNNLTATQVCPR 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01275 519 Gene3D Phosphorylase Kinase; domain 1 176 277 - -
Aip08g01275 519 PANTHER - 12 121 - -
Aip08g01275 519 ProSitePatterns Serine/Threonine protein kinases active-site signature. 323 335 IPR008271 GO:0004672|GO:0006468
Aip08g01275 519 SUPERFAMILY Protein kinase-like (PK-like) 186 473 IPR011009 -
Aip08g01275 519 Pfam Domain of unknown function (DUF3403) 474 519 IPR021820 GO:0004674
Aip08g01275 519 PANTHER - 165 511 - -
Aip08g01275 519 Pfam D-mannose binding lectin 72 116 IPR001480 -
Aip08g01275 519 SMART blect_4 29 129 IPR001480 -
Aip08g01275 519 Gene3D Transferase(Phosphotransferase) domain 1 278 480 - -
Aip08g01275 519 CDD B_lectin 30 115 IPR001480 -
Aip08g01275 519 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 165 511 - -
Aip08g01275 519 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 12 121 - -
Aip08g01275 519 ProSiteProfiles Protein kinase domain profile. 202 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01275 519 CDD STKc_IRAK 208 473 - -
Aip08g01275 519 Gene3D - 20 127 IPR036426 -
Aip08g01275 519 SMART serkin_6 202 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01275 519 Pfam Protein kinase domain 204 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01275 519 ProSiteProfiles Bulb-type lectin domain profile. 23 150 IPR001480 -
Aip08g01275 519 SUPERFAMILY alpha-D-mannose-specific plant lectins 57 116 IPR036426 -
Aip08g01275 519 ProSitePatterns Protein kinases ATP-binding region signature. 208 230 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01275 Aip-Chr8 19221285 19223909 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01275 146 519 Receptor kinase-like Gene Family AT3G45860 50.769 1.05e-123 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip08g01275 Pkinase 7.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01275 - - adu:107462379 786.178