Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip08g01275 | ATGGAAGCCTTTAGCCTTCTCCTGTTATGCTTCTCTCTGCTGAATTTAATACCATTTTGTGCTCCAAGAGACACAATTAACACACTGCAATCTATCAGTGATGGTGAGACATTAGTTTCAGCAGATGAAACCTTTGCATTGGGATTCTTCAGCCCTGGAACTTCCAAGAACCGTTATGTTGGAATTTGGTATAACAAAGATCCAAAAAAGGCAATAGTATGGGTTGCAAACAGAGAAACACCCCTCACTGACTCCTCAGGGGTTTTGAAGGTCAACACCACCGGAATTCTAGTCCTTCTTGATAGTAATAATAGTCTTATCTGGTCATCCAACACGACAGGATCGGCACGAAAAGCAATTGAACAAAATAGATCAACGAAGTCCAAGAAACGGAAGCAAAAGATTATCATTGCCGTAAGCTGTGTGTTATCTTTTGGAATTTTGATCCTATGCTTGGCCTTCATAATCTATGGATGGAAGAAGTATCACAAAGGAAAGATAAAAGAAGAAACAGAATCAGGTGCAATAAATAGTCACCATGATGAGGATGATCTGGAACTGCCCTTATTTGATATGTGCACAATTACTTCTGCAACAAGTAATTTTTCAAGTGACAATATACTAGGGACAGGTGGTTTTGGATCAGTTTATAAGGGTATCTTGGAAAATGGACGGGAAATAGCTGTCAAGAGACTTTCACAAAATTCAAGCCAAGGACTCCAAGAGTTCAAAAATGAAGTTATGCATATTGCCAAACTTCAGCACAGAAATTTAGTGAAGCTATTAGGGTATTGCATTCAAGCAGGGGAGAGAATATTGATTTATGAATTTATGCGCAACAAAAGCTTGGACTTCTTTATATTTGATTGTGAGAAGGGAAAGCTTCTAGACTGGCCAAAGCGTTTTCTTATTATTAATGGAATTGTTAGGGGTCTTCTCTATCTTCATCAAGATTCAAGACATAGAATAGTTCATAGAGATCTTAAGGCTGGAAATATTTTGTTAGATGACGAATTGAATCCTAGAATTTCAGACTTTGGACTAGCAAGAAGCTTTGTAGGAAATGAAAACCAAGCAAATACAAGGCACATTGTTGGAACTTACGGCTATCTGTCACCGGAGTACATAGTTGATGGGATATACTCAACAAAATCTGATGTCTACAGCTTCGGAGTACTGGTGTTAGAGATAGTTAGCGGGAAGAGAAACAGAGGATTCATCCATATTGATCACAATTTTAATCTGCTTGGGCATGCATGGACACTTTTCTCAGAAGGCAAGTGCTTACAAATAGTCGATCCATCTATCAAAGACTCTATTGATTTGCCAGAAGTCCTAAGATCAATTCATGTTGGTCTGCTATGCGTGCAACTAAATTCCGAGGATCGACCAAGCATGTCGTGTGTGCTTACGATGCTGAGTAGTGAATGGGCATTGCCTCAGCCAAAGAAGCCAGGGTTCTTTATTGAGAGAGATGTGGTTGGTAACCGTTCTTCGTCAAGCAACAATAAACTACTGTCTGTTAATAATCTAACAGCTACTCAGGTCTGTCCCCGATAG | 1560 | 0.3936 | MEAFSLLLLCFSLLNLIPFCAPRDTINTLQSISDGETLVSADETFALGFFSPGTSKNRYVGIWYNKDPKKAIVWVANRETPLTDSSGVLKVNTTGILVLLDSNNSLIWSSNTTGSARKAIEQNRSTKSKKRKQKIIIAVSCVLSFGILILCLAFIIYGWKKYHKGKIKEETESGAINSHHDEDDLELPLFDMCTITSATSNFSSDNILGTGGFGSVYKGILENGREIAVKRLSQNSSQGLQEFKNEVMHIAKLQHRNLVKLLGYCIQAGERILIYEFMRNKSLDFFIFDCEKGKLLDWPKRFLIINGIVRGLLYLHQDSRHRIVHRDLKAGNILLDDELNPRISDFGLARSFVGNENQANTRHIVGTYGYLSPEYIVDGIYSTKSDVYSFGVLVLEIVSGKRNRGFIHIDHNFNLLGHAWTLFSEGKCLQIVDPSIKDSIDLPEVLRSIHVGLLCVQLNSEDRPSMSCVLTMLSSEWALPQPKKPGFFIERDVVGNRSSSSNNKLLSVNNLTATQVCPR | 519 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip08g01275 | 519 | Gene3D | Phosphorylase Kinase; domain 1 | 176 | 277 | - | - | |
Aip08g01275 | 519 | PANTHER | - | 12 | 121 | - | - | |
Aip08g01275 | 519 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 323 | 335 | IPR008271 | GO:0004672|GO:0006468 | |
Aip08g01275 | 519 | SUPERFAMILY | Protein kinase-like (PK-like) | 186 | 473 | IPR011009 | - | |
Aip08g01275 | 519 | Pfam | Domain of unknown function (DUF3403) | 474 | 519 | IPR021820 | GO:0004674 | |
Aip08g01275 | 519 | PANTHER | - | 165 | 511 | - | - | |
Aip08g01275 | 519 | Pfam | D-mannose binding lectin | 72 | 116 | IPR001480 | - | |
Aip08g01275 | 519 | SMART | blect_4 | 29 | 129 | IPR001480 | - | |
Aip08g01275 | 519 | Gene3D | Transferase(Phosphotransferase) domain 1 | 278 | 480 | - | - | |
Aip08g01275 | 519 | CDD | B_lectin | 30 | 115 | IPR001480 | - | |
Aip08g01275 | 519 | PANTHER | S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED | 165 | 511 | - | - | |
Aip08g01275 | 519 | PANTHER | S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED | 12 | 121 | - | - | |
Aip08g01275 | 519 | ProSiteProfiles | Protein kinase domain profile. | 202 | 478 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Aip08g01275 | 519 | CDD | STKc_IRAK | 208 | 473 | - | - | |
Aip08g01275 | 519 | Gene3D | - | 20 | 127 | IPR036426 | - | |
Aip08g01275 | 519 | SMART | serkin_6 | 202 | 478 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Aip08g01275 | 519 | Pfam | Protein kinase domain | 204 | 467 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Aip08g01275 | 519 | ProSiteProfiles | Bulb-type lectin domain profile. | 23 | 150 | IPR001480 | - | |
Aip08g01275 | 519 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 57 | 116 | IPR036426 | - | |
Aip08g01275 | 519 | ProSitePatterns | Protein kinases ATP-binding region signature. | 208 | 230 | IPR017441 | GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip08g01275 | Aip-Chr8 | 19221285 | 19223909 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aip08g01275 | 146 | 519 | Receptor kinase-like Gene Family | AT3G45860 | 50.769 | 1.05e-123 | 375 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Aip08g01275 | Pkinase | 7.1e-45 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aip08g01275 | - | - | adu:107462379 | 786.178 |