Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01274 ATGCAAAACCAGAGAGTGCTATGGTTTTGGTCCCTTCTATTCTCATTTATATTAAGAAGCTCCACTTCACTAGACAATATAACTCCTGTTCAATCCATCACCGATGGAGAGACATTAATTTCGCTTGGAGGAACCTTTGAACTTGGCTTCTACAGCCCCGGAAATTCAAATGGCCGATACTTAGGCATATGGTACCATAACATATTCCCTAAGGTAGTGGTGTGGGTGGCAAACAGAGAAAAACCCCTCAACAACACCTCAGGAGTTCTAAAACTCACCGGCGAAGGACTACTTGTCCTTGTTAATCGCAGCAGCAACAGCAGCATTGTGTGGTCCACCAACATGTCAAGCAAAGTGGAAGATAAATGGAATCCAGTTGCACAGCTCTTGGAGTCAGGAAACCTTGTTGTCAAAGATGGCCATAATGGAGACCACTTTCTATGGCAGAGCTTTGATTATCCTTGTGATACTTCGTTGCCAGGAATGAAGCTGGGATGGGACCTTGGAACAGGTCTAGAGAGGACTCTATCATCTTCAAAAAGTATCGATGATCCCGGCCGCGGACACTACACACTTAGAATAGACCTTAGAGGTGATCCACAAATAGTTCTAATGAATGGAAATGCCACAACAATTAGAGTAGGGCCATGGAATGGGCTAATGTTTTCAGGAGCTACAACTTATTTGCGCTATAGCCAATTTTCATCTCAATTTGTTTTCAATGAACAAGAAGTGTTTGTTAGGTTCAGACCGGAAAATACATCCAAATATATTAGAGGTGTAGCGTACCCTTGGGGAGCTTTGCAGGTTTTGCATTGGTCAATACAAACCAGAGGCTGGGAGACCCTTATTTCTATACCGGAGGCCGAATGTGACAAGTATGCTATTTGTGGTGCAAATTCTATTTGCAGTACTACTCCTACTCCTGTCTGTTCATGCCTTGAAGGATTTGCACCAAAATATCCTGGAAAATGGAAGGAATCTGATTGGTCTGATGGTTGTGTTAGGATCACTCCTTTAAGTTGCAGCAGAGATGGATTCAAGAAGGTCACCGGCATAGTGTTGCCGGACACGTCTTCTTCTTGGTATAACAGGACCATGAACCTGCTGGAATGCAAGGAATTCTGTCTGAAGAATTGTTCTTGTACGGCATATTCCAATTTGGATATCCGTGATGGAGGAAGCGGTTGCTTGATCTGGTTTCATGATCTTATTGACATTAGACAAGGGTCACAAGACTTCTATATCCGAATAGATGATAAGCAGAACAATGATTCCAGCAAGAGGAAGCAAGCAGGCATCATTGTTGGCTTTATATTGTTCATCATGATCGTAATACTTGGACTGAAATTATTTCTATGGAGAAAAAAACTTGTGGAGACAGATATATTTTGGTTGAAGCAGCGTGATCACAAACGGGAAAAGGAGGATATGGACCTCCCAACATTTGATTTATCAACCATAGTTCATGCCACTGATCAATTTTCTAGCCGCAATGAATTGGGAAAAGGTGGATATGGACCAGTTTATAAGGGTGTACTTACAAATGGAACCCAGATTGCGGTCAAGAGACTTTCCAAGAACTCCGACCAAGGATTGCAGGAGTTCAAAACGGAAGTTCAGCTAATTGCAAAACTTCAGCATCGCAACCTTGTAAAACTTCTTGGTTGTTGCATTCAGCAAGAAGAGAAACTTCTGATCTATGAGCTCATGCCCAACAGAAGTTTGGACTATTTTATTTTTGATGATGCTAGAAGAAAATTATTAGATTGGACCAAGCGCTTTCACATTATTAGTGGCACAGCTCGGGGTTTAGTTTATCTGCATCAGGACTCTAGACTAAGAATCATTCATAGAGATCTAAAAACTAGTAATATTCTTCTTGATGAAGACATGAATGCAAAAATATCAGACTTCGGTGTTGCCAGGACATTTGCTGCCGATCAAACTGAGGCCAAAACAAAAAGAGTGATGGGAACTCACGGTTATATTTCTCCTGAGTATGCGGTGCGTGGATCTTTCTCAATGAAGTCTGATGTGTTTGCCTTTGGTGTAATCATGCTTGAGGTAGTCAGTGGGAGGAAGAACAGAGATTTCCGTGTTCCTGACCAAAATATTAACCTTCTTGGACATGCATGGGAGCTGTGGAATGAGGGGAGGGCTTTGGAGCTGGTAGATGAATCAGTGCGCGATTCGGTCATTGAAGTTGAAGCATTGAGATGTATACAGATAGGGCTGTTATGTGTGCAAGGGAGACCTGAAGATAGGCCTAACATGTCATCTGTAGTTCATGTGTTGGACGACGATAAACCACTGCCTCGGCCGAGGCTGCCTGCATTTTATTCACACCAAGAAGACTCTTCATTAAGTAATCATACAATTTATTCAGCAAACGAGGTTACCATGTCATTGCTAGCAGCAAGATAG 2427 0.4227 MQNQRVLWFWSLLFSFILRSSTSLDNITPVQSITDGETLISLGGTFELGFYSPGNSNGRYLGIWYHNIFPKVVVWVANREKPLNNTSGVLKLTGEGLLVLVNRSSNSSIVWSTNMSSKVEDKWNPVAQLLESGNLVVKDGHNGDHFLWQSFDYPCDTSLPGMKLGWDLGTGLERTLSSSKSIDDPGRGHYTLRIDLRGDPQIVLMNGNATTIRVGPWNGLMFSGATTYLRYSQFSSQFVFNEQEVFVRFRPENTSKYIRGVAYPWGALQVLHWSIQTRGWETLISIPEAECDKYAICGANSICSTTPTPVCSCLEGFAPKYPGKWKESDWSDGCVRITPLSCSRDGFKKVTGIVLPDTSSSWYNRTMNLLECKEFCLKNCSCTAYSNLDIRDGGSGCLIWFHDLIDIRQGSQDFYIRIDDKQNNDSSKRKQAGIIVGFILFIMIVILGLKLFLWRKKLVETDIFWLKQRDHKREKEDMDLPTFDLSTIVHATDQFSSRNELGKGGYGPVYKGVLTNGTQIAVKRLSKNSDQGLQEFKTEVQLIAKLQHRNLVKLLGCCIQQEEKLLIYELMPNRSLDYFIFDDARRKLLDWTKRFHIISGTARGLVYLHQDSRLRIIHRDLKTSNILLDEDMNAKISDFGVARTFAADQTEAKTKRVMGTHGYISPEYAVRGSFSMKSDVFAFGVIMLEVVSGRKNRDFRVPDQNINLLGHAWELWNEGRALELVDESVRDSVIEVEALRCIQIGLLCVQGRPEDRPNMSSVVHVLDDDKPLPRPRLPAFYSHQEDSSLSNHTIYSANEVTMSLLAAR 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01274 808 PANTHER - 10 805 - -
Aip08g01274 808 PIRSF SRK 2 808 IPR024171 GO:0004674
Aip08g01274 808 SMART serkin_6 495 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01274 808 CDD PAN_AP_plant 338 418 - -
Aip08g01274 808 Pfam Protein tyrosine and serine/threonine kinase 498 766 IPR001245 GO:0004672|GO:0006468
Aip08g01274 808 SMART ntp_6 342 418 IPR003609 -
Aip08g01274 808 Pfam D-mannose binding lectin 73 180 IPR001480 -
Aip08g01274 808 ProSiteProfiles Protein kinase domain profile. 495 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01274 808 Gene3D - 20 151 IPR036426 -
Aip08g01274 808 Pfam PAN-like domain 342 407 IPR003609 -
Aip08g01274 808 Gene3D Hepatocyte Growth Factor 340 417 - -
Aip08g01274 808 Gene3D Phosphorylase Kinase; domain 1 468 570 - -
Aip08g01274 808 ProSiteProfiles PAN/Apple domain profile. 342 419 IPR003609 -
Aip08g01274 808 SUPERFAMILY Protein kinase-like (PK-like) 478 787 IPR011009 -
Aip08g01274 808 PANTHER - 10 805 - -
Aip08g01274 808 Gene3D Transferase(Phosphotransferase) domain 1 571 772 - -
Aip08g01274 808 ProSiteProfiles Bulb-type lectin domain profile. 24 150 IPR001480 -
Aip08g01274 808 SMART blect_4 30 154 IPR001480 -
Aip08g01274 808 CDD B_lectin 30 154 IPR001480 -
Aip08g01274 808 Pfam S-locus glycoprotein domain 213 320 IPR000858 GO:0048544
Aip08g01274 808 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 181 IPR036426 -
Aip08g01274 808 CDD STKc_IRAK 501 767 - -
Aip08g01274 808 ProSitePatterns Serine/Threonine protein kinases active-site signature. 616 628 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01274 Aip-Chr8 19184038 19188842 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01274 483 780 Receptor kinase-like Gene Family AT4G11530 57.333 7.04e-118 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip08g01274 PK_Tyr_Ser-Thr 6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01274 - - aip:107611884 1427.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01274 08 19184038 19188842 Aip08g01274 08 19184038 19188842 ECH
Aip03g01976 03 27699008 27702357 Aip08g01274 08 19184038 19188842 PCT