Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01271 ATGGATGTGGATAATAATCATAATAGTGTTGGTGCCATGGCTAGTAGTAGGAAGAAGAAGAAGAAGAATGGGTCAATAAGTTCAATTTTCATGCATGCAGATACCAAAGACTGGTTTTTCATGCTCTTTGGTTTGTTGGGGGCAATTGGAGATGGATTAACCACACCTTTGGTCTTGTTCATCACTAGCAAGATGATGAACAACCTTGGAAGTTTTTCTAATCTTGAAGGAGGTGGTGCTTTCACTCAGAACATAAACAAGGTTCCAAATTTCTTGATGAATGCATCAATGTTTATTGGGAGCTACATAGTGGCATTTCCATTACTATGGAGACTAGCAATAGTGGGGTTCCCATTTGTGGTGTTGCTAGTGATCCCAGGCTTAATGTATGGAAGAACATTAATGGGGTTAGCAAGAAAAATAAGAGAAGAGTATAATCAAGCAGGGACAGTGGCAGAGCAAGCAATATCATCAATAAGAACAGTGTATTCTTTTGTGGGAGAGAACAAGACAATAGGTGCTTTCTCTGATGCTCTACAAGGTTCTGTTAGGTTGGGTTTGAAACAAGGGTTGGCTAAAGGGTTAGCAATTGGAAGCAATGGTGTTGTCTTTGCAATTTGGTCTTTTATGTCTTATTATGGTAGCAGGTTGGTTATGTACCATGCTGCTCAAGGTGGCACTGTTTTTGCTGTTGGTGCTGCTATTGCTCTCGGTGGATTGGCGTTAGGTGCCGGTCTATCAAATGTCAAGTACTTCTCAGAAGCAATCAAGAACGAATGA 780 0.4064 MDVDNNHNSVGAMASSRKKKKKNGSISSIFMHADTKDWFFMLFGLLGAIGDGLTTPLVLFITSKMMNNLGSFSNLEGGGAFTQNINKVPNFLMNASMFIGSYIVAFPLLWRLAIVGFPFVVLLVIPGLMYGRTLMGLARKIREEYNQAGTVAEQAISSIRTVYSFVGENKTIGAFSDALQGSVRLGLKQGLAKGLAIGSNGVVFAIWSFMSYYGSRLVMYHAAQGGTVFAVGAAIALGGLALGAGLSNVKYFSEAIKNE 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01271 259 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 86 254 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip08g01271 259 Pfam ABC transporter transmembrane region 87 232 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aip08g01271 259 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 86 256 IPR039421 -
Aip08g01271 259 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 27 87 IPR039421 -
Aip08g01271 259 Gene3D ABC transporter type 1, transmembrane domain 19 83 IPR036640 GO:0005524|GO:0016021
Aip08g01271 259 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 27 87 - -
Aip08g01271 259 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 86 256 - -
Aip08g01271 259 Gene3D ABC transporter type 1, transmembrane domain 84 258 IPR036640 GO:0005524|GO:0016021
Aip08g01271 259 SUPERFAMILY ABC transporter transmembrane region 31 244 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01271 Aip-Chr8 18937519 18939163 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01271 86 243 Calmodulin-binding Proteins AT2G36910 38.994 1.53e-28 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01271 K05658 - gmx:100807709 281.567