Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01262 ATGGGATTGCTCGAGCGTTTTGGAGCGAATGAAACTAAAGCAAACACTCGGCATGTTGTTGGAACTTACGGATATTTATCACCCGAGTACATAATTGATGGAGTTTACTCAACGAAATCCGATGTATTCACTTTTGGTGTATTGGTGTTAGAAATAGTGAGTGGGAGTAGAAATAGAGGATTCACTCATCAAGATCATAAATTTAATCTTCTAGGACATGCATGGAAACTATTTATGGAAGACAAAGGGTACGAAATAATTTATGCTCCAATAAGAGATACATCAAATTTATCTTCAATGCTAAGATCAATTCATGTGGGACTGCTTTGTGTGCAAAAAAGTCCAGATGACAGGCCAACCATGTCATCTGTTGTTCAAATGTTGAGTAGTGAATCCACACTACCTCCACCTAAAATGCCTGGGTTCTTCGCAGAAAGAGAAAAATGA 447 0.3803 MGLLERFGANETKANTRHVVGTYGYLSPEYIIDGVYSTKSDVFTFGVLVLEIVSGSRNRGFTHQDHKFNLLGHAWKLFMEDKGYEIIYAPIRDTSNLSSMLRSIHVGLLCVQKSPDDRPTMSSVVQMLSSESTLPPPKMPGFFAEREK 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01262 148 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 2 146 - -
Aip08g01262 148 Pfam Protein kinase domain 13 126 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01262 148 Gene3D Transferase(Phosphotransferase) domain 1 1 134 - -
Aip08g01262 148 ProSiteProfiles Protein kinase domain profile. 1 134 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01262 148 SUPERFAMILY Protein kinase-like (PK-like) 14 139 IPR011009 -
Aip08g01262 148 MobiDBLite consensus disorder prediction 127 148 - -
Aip08g01262 148 PANTHER GLYCOPROTEIN S6, PUTATIVE-RELATED 2 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01262 Aip-Chr8 18772675 18773523 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01262 2 143 Receptor kinase-like Gene Family AT4G11480 47.917 1.83e-42 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip08g01262 Pkinase 2.1e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01262 - - ahf:112769704 238.424
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01262 08 18772675 18773523 Aip08g01262 08 18772675 18773523 ECH