Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01260 ATGTCCATAAAGGAGGATGATGTTAAGAATGATTCTGATAATGATTTAGGTGATGATTTTGATTATCAACCGAATGCAGAAGATGATGCTGATGACGACGATGTGGATTCGCTGGATTCCACTAGCAAGAGTGAAGAAGTTTGTGGTGTAAAAAGAATAGCGGATTTAATGGTGGAGGATATTTGGAACCTGGAGTTTAGGACGGAGGATGAGGCTTGCCAATTTTATAACGCTTATTCTTGTTGGCATGGATTTGTAATGAGGAAGGACGACGTGGTTAGGGATAATCAAGGTAGAATCATTAGCAGGCAACTTGTTTGCAACAAAGAGGGCTGGAGAAATATGAGGTATCTTGATATGGATGATAGATCAAGGGAGGCAAGGTCACTAACGCGAACCAAGTGTCCAGCTCGACTTAGGGTAAAGCTTGACTACGGCTACGGTAGATGGAAGGTATCATGTTTTGTGGAATCTCACAACCACGATTTGACGCCACCCCAATTTGCGCATCTGATACCGGCCAATTGTCGTCTAACTGTCACTGATAGAGTCCAAGTGGAAAATCTTCATAATTTTGGTGTCAAGAGCTGCCATATTATGGGGTATATTGCATTCCAGAAGGGTGGATATCGTCATGCTGGCTTCACACGAAAAGATTTGTACAACCACATCGATCGCTATCGTCGGGCAAAAGTTAAAAACGGGGATGCCAATGCGGCAATAAACTATTTGATTGGCAAGTCAAACAACGATCCGCTGTTCTTTGGAAAGTATACGTTCACTAGTGACGAAAGGCTGGAGCATATTTTTTGGGCAGATGGGCAGTCAATTATCGACTATCACTGCTTTGGAGATATTGTTGCCTTTGATTCAACCTACAAGAAGAATAAATACAACAAGCCTTTGGTCATTTTCTCTGGATGCAATCATCACGGGCAGACTGTTATCTTCGGCTCCGGCCTACTATCCGACGAAACCACAGAGACGTATAAGTGGTTGTTGGAAACTTTTGTTGAAGCTATGGGTGGGAAAAGTCCAAAAGCAGTAATAACTGACGGAGACCTTGCCATGCGAGATGCAATCAAGAATGTTCTGCCTGATGCGACCCATCGGTTATGCGGATGGCATCTACAGAGAAATGCATGTGAAAATATAAAGAATCCTAATTTCCTGCGCGATTTTAAGGGTCTTATATACGACAACAACGACCAGAGAGACTTTGATCGAAGATGGGCAGCCATTTTGGATAAGCACAACCTTGTTGGCAGTACCTGGATGGAAAAGACGTACGAAACTCGTGAGATGTAG 1308 0.4312 MSIKEDDVKNDSDNDLGDDFDYQPNAEDDADDDDVDSLDSTSKSEEVCGVKRIADLMVEDIWNLEFRTEDEACQFYNAYSCWHGFVMRKDDVVRDNQGRIISRQLVCNKEGWRNMRYLDMDDRSREARSLTRTKCPARLRVKLDYGYGRWKVSCFVESHNHDLTPPQFAHLIPANCRLTVTDRVQVENLHNFGVKSCHIMGYIAFQKGGYRHAGFTRKDLYNHIDRYRRAKVKNGDANAAINYLIGKSNNDPLFFGKYTFTSDERLEHIFWADGQSIIDYHCFGDIVAFDSTYKKNKYNKPLVIFSGCNHHGQTVIFGSGLLSDETTETYKWLLETFVEAMGGKSPKAVITDGDLAMRDAIKNVLPDATHRLCGWHLQRNACENIKNPNFLRDFKGLIYDNNDQRDFDRRWAAILDKHNLVGSTWMEKTYETREM 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01260 435 Pfam FAR1 DNA-binding domain 74 164 IPR004330 -
Aip08g01260 435 PANTHER OS02G0262500 PROTEIN 60 433 - -
Aip08g01260 435 MobiDBLite consensus disorder prediction 12 39 - -
Aip08g01260 435 MobiDBLite consensus disorder prediction 1 42 - -
Aip08g01260 435 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 60 433 IPR031052 GO:0006355
Aip08g01260 435 Pfam MULE transposase domain 286 380 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01260 Aip-Chr8 18752187 18753494 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip08g01260 MULE 1.3e-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01260 - - adu:107460934 865.914