Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01256 ATGGAAACGTTCACCTTTCTTCTGTTGTGCTTCTTATTGCTGCATGATATAGCCGTTTCCACTGCCATAGAAAGCATTAGTATTACACGGTCCCTCACTGATGGTGACACCATGGTTTCAGCCGGTGGAACCTTTGCAGTTGGATTCTTAAGTATTCCAGAAAGTTCCAAGAACCGTTACCTTGGGATATGGTACAATAAAGTGCCATCTAACACAGTAGCATGGATTGCCAATAGAAACACTCCACTTAATGACTCGTCCGGGGTCTTGAAGATCACTGGCAATGGAACTCTTGCTCTTCATACTCATAACGATACCATCATTTGGCATTCCAACTCATCAAGATTCGCGCAGCGACCAGTTGCAGTGCTTTTGGATTCAGGGAACCTGGTTGTGAAGGAAGAAGGGAGCAATGATGATGATTTGAAGAGTTTCATTTGGCAGAGTTTTGATTACCCTTATGATACGCTACTGCCAGGGATGAAACTGGGAAGTGACTTAACTACAGGCCTTACAAGGTACCTAATATCGCAGATTAGTTCTGATGATCCTTCTGAAGGTAGCTATACTTATCAGCTTAATATTGTTGGATATCCTCAATTATGTATAAAAAATGGCCAATCCGTGACATATAGTAGTGGATCTTGGAACGGTCTTCGGTTTGGTGGAATTCCCCAGTTAAAACATAATAATTTTTACAACTTTTACTTTGTTTACAACAAGGAAGAGATATATTACACATATGAGCTTGTCAATAGCGCTATATATACAAGGTCTGTGCTATCTGCAGACGGATCAATGAATCGTTATGTGTGGAGTGTTAAGAATAAGAGTTGGAGTGCCTATATAATATTACCAACTGATATCTGTGATGATTATGGTAAATGTGGAGCATATGGTATCTGTAATGTAGCCAATTCCCCTGTATGTAGTTGCTTATTGAACAGATTCGAACCTAAAGTCCCTGAAGAATGGAATCAGGCAGATTGGTCTAATGGTTGTGTTAGAATCAACAAATTGAGTTGCCAGGATGATGGATTTGTAAAGTTGTCTGGTTTAAAGTTACCAAACACACAAAGAGCATCATGGTTAAATAATAGCATGAGTCTTGATGAGTGTGCTAATCTATGCATGAAGAATTGTTCCTGCACGGCTTATGCTGCTTTTGATATCAGGGAAGAAGGAAGAGGGTGTTTATTCTGGTATGATGAGCTGATAGATATTAGAGTGCTGAGTGTTCCACAGCAAGATCTTTATGTCAGAATGTCAAGGAAAGATATAGATGAAATTAAGAAGTCATCACATAAATCCAAGATCAGGAAGCTGCAGATTATTGCCTCCATCACAGTCATATCTATAGGAATTTTGATCTTATACCCATCCTTCATGCTATACAGAAGAAAGAAGCAGCAGATAAACTATAGAAACATGAGACACAGTCCAGAAAGATATACACATGTAATACAAGAGCATCAGGAGGAAGAACTAGAACTACCACTGTTTGATATGGCTACACTTATTGCTGCAACCAATAACTTCTCCACCAGTAACATATTAGGAAAAGGTGGTTTTGGAACTGTTTATCAGGGTATGCTGAAAGATGGAAGAGAAATAGCAGTTAAGAGGCTCTCAGTACATTCTAGACAAGGTCTTCAAGAGTTCAAAAGTGAAGTGTTGAATGTAGTCAAACTTCAGCATAGGAATTTGGTGAAGCTTCTAGGGTGTTGCATTCAAGCAGAAGAAAGAATGCTGGTCTATGAATATATGCCAAATAAAAGCTTGGACTACTTCATATTTGATAAAGAGAGAAGCATGCAATTAGTTTGGTCTCAGCGTTTCCTTATTATCATTGGGATTGCACGGGGCATTCTCTATCTCCATCAAGATTCGAGACATCGAATGGTTCATAGAGATCTCAAGGCTAGCAATATTCTGCTAGATGATGAAATGAATGCCAAAATCTCTGATTTTGGACTAGCCAGAAGCTTTATTGGAAATGAAAATGAAGCAAACACAACAACAATTGTCGGAACTTATGGTTATGTATCACCAGAGTACCTAATTGATGGAATTTTCTCAACAAAGTCTGATGTTTATAGCTTCGGTGTGCTTGTATTAGAGATAGTAAGTGGAAAAAGAAATAGAGGATTCAGCAACAGAAATCATCGCTTTAATCTTCTGGGGCATGTATGGAAACTCTTTATAGAAGGTAATTGCTCTGAAATAGTTGATCCGTCCATCAGAAATTCGTCCGATTTATCTGGAGTCACAAGAGCAATTCATGTGGGTCTACTTTGTGTTCAACAGAATCCAGAAGACAGGCCAAGCATGTCGCATGTTCTTATGATGCTGAGTAGCGAATGCACATTGCTTCAACCAAAAATGCCAGGGTTCTTCACTGAGAGAGATCCTGTTGGTGACACATCAAGCAAGAGTGAACTAGTGTCATTTAATGAAGTCACAGTTAGTGTGGTGCATCCACGGTAG 2487 0.392 METFTFLLLCFLLLHDIAVSTAIESISITRSLTDGDTMVSAGGTFAVGFLSIPESSKNRYLGIWYNKVPSNTVAWIANRNTPLNDSSGVLKITGNGTLALHTHNDTIIWHSNSSRFAQRPVAVLLDSGNLVVKEEGSNDDDLKSFIWQSFDYPYDTLLPGMKLGSDLTTGLTRYLISQISSDDPSEGSYTYQLNIVGYPQLCIKNGQSVTYSSGSWNGLRFGGIPQLKHNNFYNFYFVYNKEEIYYTYELVNSAIYTRSVLSADGSMNRYVWSVKNKSWSAYIILPTDICDDYGKCGAYGICNVANSPVCSCLLNRFEPKVPEEWNQADWSNGCVRINKLSCQDDGFVKLSGLKLPNTQRASWLNNSMSLDECANLCMKNCSCTAYAAFDIREEGRGCLFWYDELIDIRVLSVPQQDLYVRMSRKDIDEIKKSSHKSKIRKLQIIASITVISIGILILYPSFMLYRRKKQQINYRNMRHSPERYTHVIQEHQEEELELPLFDMATLIAATNNFSTSNILGKGGFGTVYQGMLKDGREIAVKRLSVHSRQGLQEFKSEVLNVVKLQHRNLVKLLGCCIQAEERMLVYEYMPNKSLDYFIFDKERSMQLVWSQRFLIIIGIARGILYLHQDSRHRMVHRDLKASNILLDDEMNAKISDFGLARSFIGNENEANTTTIVGTYGYVSPEYLIDGIFSTKSDVYSFGVLVLEIVSGKRNRGFSNRNHRFNLLGHVWKLFIEGNCSEIVDPSIRNSSDLSGVTRAIHVGLLCVQQNPEDRPSMSHVLMMLSSECTLLQPKMPGFFTERDPVGDTSSKSELVSFNEVTVSVVHPR 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01256 828 SMART serkin_6 513 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01256 828 CDD PAN_AP_plant 339 421 - -
Aip08g01256 828 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 11 825 - -
Aip08g01256 828 SMART blect_4 29 153 IPR001480 -
Aip08g01256 828 CDD B_lectin 29 153 IPR001480 -
Aip08g01256 828 Gene3D Hepatocyte Growth Factor 340 420 - -
Aip08g01256 828 PIRSF SRK 1 828 IPR024171 GO:0004674
Aip08g01256 828 CDD STKc_IRAK 519 784 - -
Aip08g01256 828 SMART ntp_6 342 422 IPR003609 -
Aip08g01256 828 Pfam PAN-like domain 342 408 IPR003609 -
Aip08g01256 828 Pfam D-mannose binding lectin 72 177 IPR001480 -
Aip08g01256 828 Gene3D Phosphorylase Kinase; domain 1 473 588 - -
Aip08g01256 828 Pfam Protein tyrosine and serine/threonine kinase 516 783 IPR001245 GO:0004672|GO:0006468
Aip08g01256 828 Gene3D Transferase(Phosphotransferase) domain 1 589 792 - -
Aip08g01256 828 ProSiteProfiles Protein kinase domain profile. 513 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01256 828 Pfam S-locus glycoprotein domain 211 320 IPR000858 GO:0048544
Aip08g01256 828 ProSitePatterns Protein kinases ATP-binding region signature. 519 541 IPR017441 GO:0005524
Aip08g01256 828 PANTHER - 11 825 - -
Aip08g01256 828 ProSiteProfiles Bulb-type lectin domain profile. 23 145 IPR001480 -
Aip08g01256 828 SUPERFAMILY Protein kinase-like (PK-like) 496 784 IPR011009 -
Aip08g01256 828 ProSiteProfiles PAN/Apple domain profile. 342 423 IPR003609 -
Aip08g01256 828 Gene3D - 18 150 IPR036426 -
Aip08g01256 828 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 218 IPR036426 -
Aip08g01256 828 Pfam Domain of unknown function (DUF3403) 786 828 IPR021820 GO:0004674
Aip08g01256 828 ProSitePatterns Serine/Threonine protein kinases active-site signature. 634 646 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01256 Aip-Chr8 18680457 18684340 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01256 501 828 Receptor kinase-like Gene Family AT4G23290 54.706 9.18e-115 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip08g01256 PK_Tyr_Ser-Thr 3.4e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01256 - - ahf:112769711 1618.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01256 08 18680457 18684340 Aip08g01256 08 18680457 18684340 ECH