Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01253 ATGCAACTAGTTTGGTCTCAGCGTTTCCTTTTTATCATTGGGATTGCACGGGGCGTTCTCTATCTCCATCAAGATTCAAGACATAGAATAGTTCATAGAGATCTCAAGGCTAGCAATATTCTGCTAGATGATGAAATGAATGCCAAAATCTCTGATTTTGGACTAGCCAGAAGCTTTATTGGAAATGAAAATGAAGCAAACACAACAACAATTGTTGGAACTTATGGTTATGTATCACCAGAGTACCTAATTGATGGAATTTTCTCAACGAAGTCTGATGTTTATAGCTTTGGTGTGCTTGTATTAGAGATAGTAAGTGGAAAAAGAAATAGAGGGTTCAGCAACAGAAATCATCGCTTTAATCTTCTGGGGCATGTATGGAAACTCTTTATAGAAGATAATTGCTCTGAAATAGTTGATCCGTCCATCAGAAATTCGTCCGATTTATCCAGAGTCATAAGAGCAATTCATGTGGGTCTACTTTGCGTTCAACAGAATCCAGAAGACAGGCCAAGCATGTTGCATGTTCTTATGATGCTGAGTAGCGAATGCACATTGCTTCAACCAAAAATGCCAGGGTTCTTCACTGAGAGAGATCTTGTTGGTGACACTTCATCAAGCAAGAGTGAACTAGTGTCATTTAATGAAATCTCAGTTAGTGTGGTGCATCCACGGTAG 678 0.3909 MQLVWSQRFLFIIGIARGVLYLHQDSRHRIVHRDLKASNILLDDEMNAKISDFGLARSFIGNENEANTTTIVGTYGYVSPEYLIDGIFSTKSDVYSFGVLVLEIVSGKRNRGFSNRNHRFNLLGHVWKLFIEDNCSEIVDPSIRNSSDLSRVIRAIHVGLLCVQQNPEDRPSMLHVLMMLSSECTLLQPKMPGFFTERDLVGDTSSSKSELVSFNEISVSVVHPR 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01253 225 SMART serkin_6 2 185 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01253 225 PANTHER GLYCOPROTEIN S6, PUTATIVE-RELATED 2 200 - -
Aip08g01253 225 Gene3D Transferase(Phosphotransferase) domain 1 1 189 - -
Aip08g01253 225 ProSitePatterns Serine/Threonine protein kinases active-site signature. 30 42 IPR008271 GO:0004672|GO:0006468
Aip08g01253 225 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 2 200 - -
Aip08g01253 225 SUPERFAMILY Protein kinase-like (PK-like) 5 180 IPR011009 -
Aip08g01253 225 Pfam Protein kinase domain 12 177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01253 225 ProSiteProfiles Protein kinase domain profile. 1 191 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01253 225 Pfam Domain of unknown function (DUF3403) 182 225 IPR021820 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01253 Aip-Chr8 18623666 18624587 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01253 1 225 Receptor kinase-like Gene Family AT4G23290 53.586 5.90e-74 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip08g01253 Pkinase 1e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01253 - - ahf:112769711 426.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01253 08 18623666 18624587 Aip08g01253 08 18623666 18624587 ECH