Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip08g01252 ATGGAAACGTTCACCTTGCTTCTGTTGTGCTTCTTATTCCTGCATGATATAGCCGTTTCCACTGCCATAGAAAGCATTACTATTACACAGTCCCTCACTGATGGTGACACCATGGTTTCAGCCGGTGGAACCTTTGTAGCTGGATTCTGCAGTATCCCAGAAAGTTCCAAGAACCGTTACGTTGGAATATGGTACAGTAAAGTGCCATCTAGGACAATAGTATGGATTGCCAATAGAAACACTCCACTTAATGACTCATCCGGGGTCTTGAAGATCACTGGCAATGGAACTCTTGCTCTTTATAGTCATAACAATACCATCATTTGGCATTCCGACTTATCAAGATTCGCACAGCGGCCGGTTGCGGTGCTTTTGGATTCAGGGAATCTCATTGTGAAGGAAGATGGGAGCAATGATGATGATTTGAAGAGTTTTATTTGGCAGAGTTTTGATTACCCTTATAACACGCTACTGCCGGGGATGAAACTGGGAAGTGACTTAACTACAGGCCTTACAAGGTACCTAATATCGCCGATTAGTTCTGATGACCCTTCTGAAGGTAGCTATACTCATCAGCTTAATAGTGTTGGATATCCTCAATTATGTACAAAAGATGGCCAATCCATGACATATAGTAGTGGATCTTGGAACGGTGTTCGGTTCGGCGGAATTCCCCAGTTAAAACATAATACTATATACACCTATTACTTTGTTTACAACAAGGAAGAGATATATTACTCGTATGAGCTTGAGAATAGCGCTGTATATTCAAGGTTTGTGCTAACCGCAGACGGATCAATGATTCGTTATGTGTGGAGTGTTACGAATAAGAGTTGGAGTGTCTATCTAACATTACCAACTGATATCTGTGATGATTATGGTAAATGTGGAGCATATGGTATCTGTAATGTAGCCAATTCCCCTGATGATGGATTTGTACAGTTGTCTGGTTTGAAGTTACCAAACACACAAAGAGCATCAGGGTTAAATAATAGCATGAGTCTTGAGGAGTGTGCTAATTTATGCATGAAGAATTGTTCCTGCACGGCTTATGCTTCCTTGGATATCAGGAATGGAGGAAGAGGGTGTTTATTCTGGTACGATGAGCTGATAGATATTAGAGTTCTGAGTGATCCACAGCAAGATCTTTTTGTCAGAATGTCAAGGAAAGATATAGATGAAATTAAGAAGTCATCACATAAATCCAAGATCAGGAAGCTGCAGATTATTGCTTCCATCACAGTCATATCTGTAGGAATTTTGATCCTATGCCTATCCTTCACCCTATACAGAAGAAAGAAGCAGCAGATAAACTATGGAAACATGAGAGACAGTCCAGAAAGATATGCACATGTAATACAAGAGCATCAGGAGGAAGAACTAGAACTACCATTGTTTGATATGGCTACACTTATTGCTGCAACCAATAACTTCTCCACCAGTAACATACTAGGAAAAGGTGGTTTTGGAACTGTTTATCAGGGTATGCTGAGAGATGGAAGAGAAATAGCAGTTAAGAGGCTCTCGGTAAATTCTAGACAAGGTCTTCAAGAGTTCAAAAGTGAAGTGTTGAATGTAGTCAAACTTCAGCATAGGAATTTGGTGAAGCTTCTAGGGTGTTGCATTCAAGCAGAAGAAAGAATGCTGGTCTATGAATATATGCCAAATAAAAGCTTGGACTACTTCATATTTGGTTTGTTTCTAAGTTGA 1710 0.4012 METFTLLLLCFLFLHDIAVSTAIESITITQSLTDGDTMVSAGGTFVAGFCSIPESSKNRYVGIWYSKVPSRTIVWIANRNTPLNDSSGVLKITGNGTLALYSHNNTIIWHSDLSRFAQRPVAVLLDSGNLIVKEDGSNDDDLKSFIWQSFDYPYNTLLPGMKLGSDLTTGLTRYLISPISSDDPSEGSYTHQLNSVGYPQLCTKDGQSMTYSSGSWNGVRFGGIPQLKHNTIYTYYFVYNKEEIYYSYELENSAVYSRFVLTADGSMIRYVWSVTNKSWSVYLTLPTDICDDYGKCGAYGICNVANSPDDGFVQLSGLKLPNTQRASGLNNSMSLEECANLCMKNCSCTAYASLDIRNGGRGCLFWYDELIDIRVLSDPQQDLFVRMSRKDIDEIKKSSHKSKIRKLQIIASITVISVGILILCLSFTLYRRKKQQINYGNMRDSPERYAHVIQEHQEEELELPLFDMATLIAATNNFSTSNILGKGGFGTVYQGMLRDGREIAVKRLSVNSRQGLQEFKSEVLNVVKLQHRNLVKLLGCCIQAEERMLVYEYMPNKSLDYFIFGLFLS 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip08g01252 569 Pfam D-mannose binding lectin 72 177 IPR001480 -
Aip08g01252 569 ProSiteProfiles PAN/Apple domain profile. 302 388 IPR003609 -
Aip08g01252 569 ProSiteProfiles Bulb-type lectin domain profile. 23 145 IPR001480 -
Aip08g01252 569 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 309 564 - -
Aip08g01252 569 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 10 308 - -
Aip08g01252 569 PANTHER - 309 564 - -
Aip08g01252 569 PANTHER - 10 308 - -
Aip08g01252 569 CDD B_lectin 29 153 IPR001480 -
Aip08g01252 569 Gene3D Phosphorylase Kinase; domain 1 440 553 - -
Aip08g01252 569 Pfam PAN-like domain 306 373 IPR003609 -
Aip08g01252 569 Pfam S-locus glycoprotein domain 211 308 IPR000858 GO:0048544
Aip08g01252 569 SMART blect_4 29 153 IPR001480 -
Aip08g01252 569 CDD PAN_AP_plant 306 386 - -
Aip08g01252 569 Pfam Protein tyrosine and serine/threonine kinase 481 563 IPR001245 GO:0004672|GO:0006468
Aip08g01252 569 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 181 IPR036426 -
Aip08g01252 569 ProSitePatterns Protein kinases ATP-binding region signature. 484 506 IPR017441 GO:0005524
Aip08g01252 569 SMART ntp_6 307 387 IPR003609 -
Aip08g01252 569 ProSiteProfiles Protein kinase domain profile. 478 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip08g01252 569 SUPERFAMILY Protein kinase-like (PK-like) 455 567 IPR011009 -
Aip08g01252 569 Gene3D - 18 150 IPR036426 -
Aip08g01252 569 Gene3D Hepatocyte Growth Factor 303 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip08g01252 Aip-Chr8 18620860 18623157 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip08g01252 333 564 Receptor kinase-like Gene Family AT4G23220 40.083 9.53e-39 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip08g01252 B_lectin 7.1e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip08g01252 - - ahf:112705344 987.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip08g01252 08 18620860 18623157 Aip08g01252 08 18620860 18623157 ECH